Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g03006 ATGGGTTCATCAATCCTTGGCCCCAAAGAAATTGAGATGTTTGAAGGGCAAGCTCTATTGTATAGACAGTGTTGTGCCTACATAGATTCCATGTGTATTAAGTGGTGTGTTGAGCTCAACATAGCAGACATAATCCACAACCATGGCCAACCCATTACCCTTCATCACTTGGTCTCAACATTGCAACTTATTATTATTATTATTATTATTATAATCCATGACGAAAACAAACAAGAGAAGGAAGCATATGCCCTCACCATTGCATCAAAGCTCCTTGTTAGTAGCAATGATTATTGTTTATCTCCAATGGTTAAGTATGCTACTGATCCAGTTACAATGGGTCCACTCAATCAATTGAAGGCATGGATTTATGGGGAAGATAATCTCTCACTCTTTGGCATGGCCAAAGGAATTGAATTTTGGGAGTTTCTCAACATAAACCCTAAATATCAGAAGTCCTTCAATGAGGCAATGGCTTGTGACTCTAAAATGATAAACTTGGCATTAAGAAGTTGTGGTTTGGTCTTTGAGGGGCTTGAATCCATTGTGGATGTTGGTGGTGGAATTGGAACAACTGCTAAGATTATTAGTGAGGCATTTCCTAAGTTGAAATGCATAGTATTTGATCTTCCCCAGGTTGTGGAAAATTTGTTAGCAACCAATAATTTGAGCTTTGTTGGTGGTGACATGTTCAAATCTATTCCTAAAGCACATGCAGTTCTACTCAAGAATATTATACATGATTGGGATGAGGAAAATTGTGTGAAGATACTGAGAAATTGTAAAGATGCTATTTCCAGCAATGGGAAAAGAGGAAAAGTGATTATTATAGAGTCTGTGATCAATGAAAAGCAGGACAAGCATGACATCACTGACATGAAGCTCAAATTTGATATATACATGACATGTAACAATGGAGCACAGAAAACTGAAGAAGAATTGAAGAAAATCTTTATAGAAGCAGGCTTTCAAGGGTACAAACTATTCCCTATAGCTGGAATTGTGTCACTTGTTGAGTCAGTTCCTCCTTCCCTCTGCCTTATTGTGCACTATCTCACTTCGCGTAGTCATGGCCTTCCGCGCAGTCACAGTCGCAATCGCCCTCGACACAGTTTGCAGCTGCCATCATCCTCCGCGCAGTTTCCACTCGCTCATGGAGCTAAAGTTAAATGCCTTTCAGATATATTGGCTGTGTTTTTTAATGTTGTTGGTGGATGGACACTTGCAAAGACCGCTAGAAATCTTGCAATAACAACTGCAATTTATAGCAGTTTCATGGAGTTCCCTATCCCAAAAGGTGTTGCATTCATAGGTGAAGTTGGCCTCGGTGGAGAGCTGCACATGCAAAAGAATAATCTATCTGGATTCTTCACCATCCCAACAATATTGCATGAGAACCACAATAACAAATTGGGGCAACCCATTTCTTCTTCCTCGGAGCTCCAGCATTCCCACCAGAATTTAGGCCCCAGCCTGAATCGTCTCTGCTTCGTGGGTTTGATGATGAACAACGCTCTCCATTACCAATCATGGTCTCCTAGGGTTTGTATTTGGGTTGGGAGAAGAGTGAGAGATTAG 1578 0.4062 MGSSILGPKEIEMFEGQALLYRQCCAYIDSMCIKWCVELNIADIIHNHGQPITLHHLVSTLQLIIIIIIIIIHDENKQEKEAYALTIASKLLVSSNDYCLSPMVKYATDPVTMGPLNQLKAWIYGEDNLSLFGMAKGIEFWEFLNINPKYQKSFNEAMACDSKMINLALRSCGLVFEGLESIVDVGGGIGTTAKIISEAFPKLKCIVFDLPQVVENLLATNNLSFVGGDMFKSIPKAHAVLLKNIIHDWDEENCVKILRNCKDAISSNGKRGKVIIIESVINEKQDKHDITDMKLKFDIYMTCNNGAQKTEEELKKIFIEAGFQGYKLFPIAGIVSLVESVPPSLCLIVHYLTSRSHGLPRSHSRNRPRHSLQLPSSSAQFPLAHGAKVKCLSDILAVFFNVVGGWTLAKTARNLAITTAIYSSFMEFPIPKGVAFIGEVGLGGELHMQKNNLSGFFTIPTILHENHNNKLGQPISSSSELQHSHQNLGPSLNRLCFVGLMMNNALHYQSWSPRVCIWVGRRVRD 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g03006 525 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 98 339 IPR029063 -
Adu04g03006 525 Pfam O-methyltransferase domain 118 324 IPR001077 GO:0008171
Adu04g03006 525 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 342 IPR016461 GO:0008168
Adu04g03006 525 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 3 339 - -
Adu04g03006 525 SUPERFAMILY "Winged helix" DNA-binding domain 12 96 IPR036390 -
Adu04g03006 525 SUPERFAMILY Ribosomal protein S5 domain 2-like 397 447 IPR020568 -
Adu04g03006 525 Pfam Dimerisation domain 31 62 IPR012967 GO:0046983
Adu04g03006 525 Gene3D Vaccinia Virus protein VP39 94 342 IPR029063 -
Adu04g03006 525 Gene3D - 3 92 IPR036388 -
Adu04g03006 525 PANTHER O-METHYLTRANSFERASE 3 339 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g03006 Adu-Chr4 118273462 118283643 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g03006 1 339 Monolignol Biosynthesis Gene Families AT5G54160 31.492 5.58e-45 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g03006 K22588 K13262 gmx:100813225 403.29