Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g03005 ATGGATTTACTAAGTGGTCGCAAATCAAATGAGATTTTTGAAGGGCAAGTTCATGTGTACAAACACATGTATGCTTACTTAGATTCTATGTGCCTTAAATGGTGCATTGAGTTAGAAATACCAACCATAATCTACAACCATGAAAAACCCATCACCCTTCATGAATTGATCTCAATTTTACAAGTTCCACCATCCAAAATTAGTGGTGTGGAGCGTCTTATGCGCCACCTAAGTCACAATGGATTCTTTGATATTGTAACAATCCATGATGATGATGATGAAAACAAAGAAGAAAAGGAAGCATATGCTCTCACTATTGCTTCTGAGCTTCTTGTTAAAGGCACTGAATATTGTTTAACTCCAATGGCTAAGTGTGGTCTTAATCCCCTTATGTCAAGTTCTTTTAACTTATTAGGAAAATGGACTTTAGAAAAAAATCTTACTTTATCTGAAATTTCCCTTGGAACAAATCTTTGGGACTTTCTTAGCAAAAACCCTTCAATTTTGACTTCCTTTAATGAGTCAATGGCTAGTGACTCTCAAATGGTGAAGTTGGCATTGAAAGATCATAGTGCTGTTTTTGAAGGGTTGGAATCCATTGTAGATGTTGGTGGTGGAAATGGAACCATATCTAAGATTATTAGTGACATGTTTCCCAAATTGAAGTGCATAGTGTTTGACCTTCCACATGTTGTGGAGAATTTTTCAGGAACCAGCAGCAACAATTTGAGCTTTGTTGGTGGAGACATgttcaattatatatTCATCGTCCTCACTGCGCCGCCTCAGCCATGGGTGAAGCAGAAAAGAGTGCGCGAAGAGAAAGAGACCGATGGGAGAGCGTGCGCGCGGGAAGGGAGAAGCCAGTTATGCCACCGTCGCCGCGTCCAGCCGCCGCCAGGGAGCCCCACGCTgcctttgccgctcgaaaccttcctgctgtcgccgggaaataccgccgtcgccgtcgccggagttctggttgccgctgttgcttgggatggctgccggtgttgctgcaaaaccgatttagcgaccgccactgttttgttcttattaaaggtcgtgttctga 1074 0.3464 MDLLSGRKSNEIFEGQVHVYKHMYAYLDSMCLKWCIELEIPTIIYNHEKPITLHELISILQVPPSKISGVERLMRHLSHNGFFDIVTIHDDDDENKEEKEAYALTIASELLVKGTEYCLTPMAKCGLNPLMSSSFNLLGKWTLEKNLTLSEISLGTNLWDFLSKNPSILTSFNESMASDSQMVKLALKDHSAVFEGLESIVDVGGGNGTISKIISDMFPKLKCIVFDLPHVVENFSGTSSNNLSFVGGDMFNYIFIVLTAPPQPWVKQKRVREEKETDGRACAREGRSQLCHRRRVQPPPGSPTLPLPLETFLLSPGNTAVAVAGVLVAAVAWDGCRCCCKTDLATATVLFLLKVVF 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g03005 357 SUPERFAMILY "Winged helix" DNA-binding domain 9 114 IPR036390 -
Adu04g03005 357 Gene3D Vaccinia Virus protein VP39 112 260 IPR029063 -
Adu04g03005 357 Gene3D - 5 111 IPR036388 -
Adu04g03005 357 Pfam Dimerisation domain 30 77 IPR012967 GO:0046983
Adu04g03005 357 Pfam O-methyltransferase domain 152 252 IPR001077 GO:0008171
Adu04g03005 357 PANTHER O-METHYLTRANSFERASE 4 254 IPR016461 GO:0008168
Adu04g03005 357 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 254 IPR016461 GO:0008168
Adu04g03005 357 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 4 254 - -
Adu04g03005 357 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 118 253 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g03005 Adu-Chr4 118257999 118262540 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g03005 30 251 Monolignol Biosynthesis Gene Families AT5G54160 28.947 1.27e-16 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g03005 K22588 K13262 gmx:100813225 305.834