Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02984 ATGGTGGCCGCCAAGAAGACCAAGAAGACTCATGAGAGCATCAACAACAGACTCGCACTTGTCATGAAGAGTGGCAAGTACACTCTCGGTTACAAGACCGTTCTCAAATCTCTCAGAAGCTCCAAAGAAATAGAGTACTATGCCATGTTGGCAAAGGTTGGAGTACATCATTACAATGGGAACAATGTCGACTTGGGCACTGCATGTGGAAAATATTACAGAGTGTGCTGCCTCAGCATTATTGATCCTGGTGATTCTGATATCATTAAGACGCTGCCTGGCGAACAGTAA 291 0.4502 MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDPGDSDIIKTLPGEQ 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02984 96 Gene3D - 42 92 IPR029064 -
Adu04g02984 96 SUPERFAMILY L30e-like 13 90 IPR029064 -
Adu04g02984 96 Gene3D - 1 41 IPR029064 -
Adu04g02984 96 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 42 89 IPR004038 -
Adu04g02984 96 ProSitePatterns Ribosomal protein L30e signature 2. 64 84 IPR022991 -
Adu04g02984 96 PANTHER 60S RIBOSOMAL PROTEIN L30-LIKE 42 96 - -
Adu04g02984 96 PANTHER 60S RIBOSOMAL PROTEIN L30-LIKE 1 42 - -
Adu04g02984 96 PANTHER RIBOSOMAL PROTEIN L30 42 96 IPR039109 GO:0003723
Adu04g02984 96 PANTHER RIBOSOMAL PROTEIN L30 1 42 IPR039109 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02984 Adu-Chr4 118087440 118088847 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02984 1 96 Cytoplasmic Ribosomal Protein Gene Family AT1G36240 76.786 3.09e-57 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02984 K02908 - gmx:100806260 187.193