Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02970 ATGGTGAACCTAACCCATGATAGAGCAACTGCACAAACAGCTGAGGTGTTATGTTCTCCAGCCTATTGTTCTGGTCAGTGGCTGTTGCTTCAAGATATGGGAATCAAGTTGAATTCAAGATCTGAGTGTGTAAGTGAGACAGTGATAGCAATATATATGCACTGTAAGGCAATGAGGCTTGTCATAATAATACCTCTCTGTGTTATTGTTCTGTTCTCTTATGCAGCTGCATATGATCCTTTGGATCCAAATGGAAACATAACAATCAAATGGGATGTTATGTCTTGGACACCAGACGGCTATGTGGCAGTGGTAACAATGAGCAATTTCCAAATGTTCCGGCACATCCCGAATCCGGGATGGACCCTAGGATGGTCATGGGCAAAGAAAGAGGTTATATGGACCATGGTAGGAGCTCAAACAACAGAGCAAGGAGATTGTTCTAAGTTCAAAGGCAATGTACCTCACTGCTGCAAGAAAACTCCAACAGTTGTAGACCTTCTCCCTGGTGTACCTTACAATCAGCAATACTCAAACTGCTGCAAGGGTGGAGTGGTTTCAGCATGGGGCCAAGATCCTTCGAGCGCTGTCTCCGCCTTCCAAGTCAGTGTTGGACAAGCTGGCACCTCCAACAAGACAGTTAAACTCCCCAAGAACTTCACTCTCTTGGCTCCAGGACCTGGCTATACCTGTGGCCCTGCCAAGGTTGTTCCCTCCACTGTTTTCCTTACACAAGATAAGCGCCGCAAGACTCAAGCACTAATGACATGGAATGTTACCTGCACATACTCGCAATTTCTGGCTAGAAAGAACCCGAGTTGCTGTGTATCTTTGTCATCCTTCTACAATGAAACCATTACTCCTTGTCCTACTTGTGCCTGTGGTTGCCAAAACAAGAAGAATTGTGTCAAGAGTGACTCGAAATTCCTCAACACACCCGGCGCTCACACTCCGAAGAGAGACAATGATCCATTGCTGCAGTGCACTCATCATATGTGTCCAATCAGGGTACACTGGCATGTGAAGCTCAACTACAAGGACTACTGGCGAGTCAAGATCGCCATAACGAACTTCAACTATAGAATGAACTACACCCTCTGGACTCTCGCCGTCCAGCATCCGAATCTCAACAATATCACCCAAGTTTTCAGTTTTGATTACAGGCCAATTCTTCCCTATGTGTCCATCAATGATACTGGTATGTTCTATGGCATGAAATTCTATAATGATCTATTAATGGAAGCTGGACCAAGTGGGAATGTTCAATCCGAAGTGCTTCTTCGAAAGGATCAGGATACCTTCACGTTCAAGCAAGGATGGGCGTTTCCTCGCAAGGTTTACTTCAATGGTGAAGAATGCATGCTTCCACCACCAGATACCTACCCATTCCTCCCCAATGCTGCTCCTGTAAAGCTACTTAACTTAACATCACTCATTTTCTTCTTGATTCTCTTGCTTGTAGCTTAG 1467 0.4513 MVNLTHDRATAQTAEVLCSPAYCSGQWLLLQDMGIKLNSRSECVSETVIAIYMHCKAMRLVIIIPLCVIVLFSYAAAYDPLDPNGNITIKWDVMSWTPDGYVAVVTMSNFQMFRHIPNPGWTLGWSWAKKEVIWTMVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQYSNCCKGGVVSAWGQDPSSAVSAFQVSVGQAGTSNKTVKLPKNFTLLAPGPGYTCGPAKVVPSTVFLTQDKRRKTQALMTWNVTCTYSQFLARKNPSCCVSLSSFYNETITPCPTCACGCQNKKNCVKSDSKFLNTPGAHTPKRDNDPLLQCTHHMCPIRVHWHVKLNYKDYWRVKIAITNFNYRMNYTLWTLAVQHPNLNNITQVFSFDYRPILPYVSINDTGMFYGMKFYNDLLMEAGPSGNVQSEVLLRKDQDTFTFKQGWAFPRKVYFNGEECMLPPPDTYPFLPNAAPVKLLNLTSLIFFLILLLVA 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02970 488 Pfam COBRA-like protein 101 264 IPR006918 GO:0010215|GO:0031225
Adu04g02970 488 PANTHER COBRA-LIKE PROTEIN 61 486 - -
Adu04g02970 488 PIRSF COBRA 47 488 IPR006918 GO:0010215|GO:0031225
Adu04g02970 488 PANTHER PROTEIN COBRA 61 486 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02970 Adu-Chr4 117915441 117917663 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02970 77 485 COBRA Gene Family AT3G29810 66.748 0.0 614
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02970 - - gmx:100783410 817.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g02970 04 117915441 117917663 Adu10g02456 10 100451138 100454143 PCT