Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02969 ATGGGCTTCTTCTTCTCTTTGATGTCACACCACAAAGCTGTTCCCACTTGCTTTGTGTTCTTCTTCCTGCTTTCTTGCACCTGCTTCACTTCAACAGAAGCTTACGATGCACTTGACCCAAATGGAAACATCACAATCAAATGGGATATCATAAGCTGGACACCTGATGGTTATGTTGCTGTCGTTACGATGAACAACTTCCAACAATATCGGCATATTGCAGCACCTGGCTGGTCAATGGGATGGACATGGGCGAAGAAGGAGGTTATATGGAGCATGATGGGAGGACAGACCACTGAACAAGGAGATTGTTCAAAGTTTAAGGGAAACCCTCCACATTGCTGTAAGAAGGATCCGACCGTTGTGGATTTACTTCCCGGCACACCTTACAACCAGCAAATAGCAAATTGCTGCAAGGGTGGAGTACTTAGCTCATGGGCCCAGGATCCGACCAACGCAGTCGCATCGTTTCAAGTCAGTGTTGGTAGAGCTGGAACCACCAACAGAACTGTCAAAGTGCCCAAAAATTTCACCTTGAAAGCTCCCGGTCCGGGCTATACATGCGGGCCAGCAAAAATTGTGCCCCCAACAAAGTTCATTCAATCAGACAAAAGAAGAGTGACCCAAGCACTCATGACATGGAACGTGACATGCACATATTCGCAGTTTCTAGCCCAAAAAACTCCCACTTGCTGTGTCTCTCTCTCGTCGTTCTATAATGATACTATTGTGCCTTGCCCAACATGTGCATGTGGCTGCCAGAGCAACTCATCTTGTGTAAATGCAAATACGCCACATTTGGCATCGGTCGTTGCTGGAAAGAATAACTTTTCTCCTTTAGTTCAATGCACTAGCCATATGTGTCCGGTTAGAGTCCACTGGCACGTTAAGCTTAACTACAAGGAGTACTGGCGCGTGAAGGTCACGGTTACCAATTTCAATTACAGGATGAATTATTCAGAGTGGAACTTAGTTGTTCAACACCCGAACTTTGATAATCTGACTCAACTTTTCAGTTTCAACTACAAGTCATTAACTCCTTATGGTGACATAAATGATACTGCTATGCTTTGGGGAGTTAAGTTCTATAATGATTTTCTCAATGAAGCTGGGCCTAATGGTAATGTACAATCAGAGTTGCTCTTCAGAAAGGATAAGTCAACTTTCACTTTCGAAAAAGGTTGGGCTTTCCCTCGAAGGATCTATTTCAATGGCGACAATTGCGTGATGCCACCACCGGATGCTTATCCATGGTTGCCTAATGCTGGTTCTCAAAAGGAAGTTTCCTTGCTTGTTTTAGTGTTGGCTTATTTGGTATCCTTGCTCTTTTACGCATGTGCTTGA 1344 0.4442 MGFFFSLMSHHKAVPTCFVFFFLLSCTCFTSTEAYDALDPNGNITIKWDIISWTPDGYVAVVTMNNFQQYRHIAAPGWSMGWTWAKKEVIWSMMGGQTTEQGDCSKFKGNPPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLSSWAQDPTNAVASFQVSVGRAGTTNRTVKVPKNFTLKAPGPGYTCGPAKIVPPTKFIQSDKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVPCPTCACGCQSNSSCVNANTPHLASVVAGKNNFSPLVQCTSHMCPVRVHWHVKLNYKEYWRVKVTVTNFNYRMNYSEWNLVVQHPNFDNLTQLFSFNYKSLTPYGDINDTAMLWGVKFYNDFLNEAGPNGNVQSELLFRKDKSTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPNAGSQKEVSLLVLVLAYLVSLLFYACA 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02969 447 Pfam COBRA-like protein 58 221 IPR006918 GO:0010215|GO:0031225
Adu04g02969 447 PANTHER PROTEIN COBRA 12 446 IPR006918 GO:0010215|GO:0031225
Adu04g02969 447 PANTHER COBRA-LIKE PROTEIN 12 446 - -
Adu04g02969 447 PIRSF COBRA 6 447 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02969 Adu-Chr4 117912212 117914785 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02969 20 445 COBRA Gene Family AT3G02210 74.769 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02969 - - gmx:100783820 846.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g02969 04 117912212 117914785 Adu04g02969 04 117912212 117914785 ECH
Adu10g02456 10 100451138 100454143 Adu04g02969 04 117912212 117914785 PCT
Adu04g02969 04 117912212 117914785 Adu10g02455 10 100447746 100450927 PCT