Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02968 ATGCGATTCTCTTTCATAGAGCACAAAGCACTTCATACTTGCTATTGCTTTGTGTTCTTATTCCTACTTTCCTTCTCTTCATCAGAAGCTTATGATGCACTTGACCCAAATGGAAATATCACAATCAAATGGGATGTTATTAGCTGGACAGCTGATGGTTATGTTGCTGTTGTTACAATAAACAACTTCCAACAATATCGCCATATCTCTGCACCTGGCTGGTCATTAACATGGGCATGGGCCGGCAAAGAGGTTATATGGAACATCAAGGGAGCCATGACTACTGAACAAGGAAACTGTTCAAGGCTATTTAAGGGAATAAGCCTCCCACATTCTTGTCAAAAGAATCCAACACTTGTGGATTTACTTCCCAACACACCTTACAACCAAAAACTTCCAAATTGTTGCAAAGGTGGAGTGCTTACTTCATGGACTCAAGATCCAACTAATTCGGTTGCATCATTTCAACTCACTGTTGGTCATTCTGGAACCACCAACCGAACCGTCCAAGTACCAAAGAACTTCACCTTCCATGCGCCCGGTTCGGGTTATACTTGCGGCCCGGCCAAGATTGTTAGACCAACGATGTTCATTTCACCAGACAAAAGGAGAGTCACCCAAGCGATAATGACATGGAATGTGACATGCACGTATTCACATTTTCTAGCTCAAAAATCTACTCCCACTTGCTGTGTCTCCCTCTCAACGTTTTATAATGATACTACAGTGCCTTGCCCAACATGTTCATGTGCCTGCAAGCATAGCAACTCAACCTGTGTCAAAACAGATACCGGAAAGAATCCTTCAGTTGAATGTAGTAATCATATGTGTCCAATCAGTGTCCACTGGCACCTTAATCTTAATAAAAAGAACTACTGGCGTGTGAATGTTACTATTTCCAATCTCAATTATAGGATGAATTATTCAGATTGGAACATGGTTATTCAACACCCTAATTTCATCAATAATCTCGCTCAAGTTTTCGGATTAAAGTACAAGTTATTTACTCCTCTAGATGATATTCATGTGGCTATGGTTTGGGGAATTAAGTTCTACAATAATGTTCTCATTGAAGCTAGTAATGTAGAATTTGAGGTACTATTTAGAAAGGATAATAACTCAAGTTTGAGTAGTTTGAAGAAAGATTGGGGTTTCCCTCAAGGGATCTATTTCAATGGTGACCGCTGTGTAATGCCACCACCTCATGCTTATCCATGGTTGCCTAATTATGCTTGA 1236 0.4029 MRFSFIEHKALHTCYCFVFLFLLSFSSSEAYDALDPNGNITIKWDVISWTADGYVAVVTINNFQQYRHISAPGWSLTWAWAGKEVIWNIKGAMTTEQGNCSRLFKGISLPHSCQKNPTLVDLLPNTPYNQKLPNCCKGGVLTSWTQDPTNSVASFQLTVGHSGTTNRTVQVPKNFTFHAPGSGYTCGPAKIVRPTMFISPDKRRVTQAIMTWNVTCTYSHFLAQKSTPTCCVSLSTFYNDTTVPCPTCSCACKHSNSTCVKTDTGKNPSVECSNHMCPISVHWHLNLNKKNYWRVNVTISNLNYRMNYSDWNMVIQHPNFINNLAQVFGLKYKLFTPLDDIHVAMVWGIKFYNNVLIEASNVEFEVLFRKDNNSSLSSLKKDWGFPQGIYFNGDRCVMPPPHAYPWLPNYA 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02968 411 PIRSF COBRA 3 411 IPR006918 GO:0010215|GO:0031225
Adu04g02968 411 PANTHER COBRA-LIKE PROTEIN 13 410 - -
Adu04g02968 411 PANTHER PROTEIN COBRA 13 410 IPR006918 GO:0010215|GO:0031225
Adu04g02968 411 Pfam COBRA-like protein 54 219 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02968 Adu-Chr4 117900015 117908838 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02968 1 409 COBRA Gene Family AT3G02210 58.565 0.0 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02968 - - gmx:100783820 568.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g02968 04 117900015 117908838 Adu04g02968 04 117900015 117908838 ECH
Adu10g02455 10 100447746 100450927 Adu04g02968 04 117900015 117908838 PCT