Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02961 ATGTTTCTCAAATGTTTACGCTTTGCTGATTCAAAGAAGGGGGGAAAATATCCAATAGTAATAGAAGAGCAATGCCATCATTTTTCATTTGAAGCTCTTAGAAAGGCAACCAACGACTTTGACGAGAAACTTCAAATTGGAGAAGGAGGCTTTGGTAAGTTTTACAAAGGTTGTCTCAAACATAATAATGGTGATGCAAGTGATCATACGATCGCATTGAAGGTGATGCCTATTTGGATGTCCCATGAATATTATGAGTTCAAGAAGGAAATTGAGATGCTATGTGAGCTTCGTCACACAAATATAATCTCCCTTATAGGCTTCTGCTACCGAAAACAGAAACGTATTGTTGTATATGAGTACATGGTGAATGGATCACTCCATGATTACTTGAATAATAAGAACAAAGAACCACTGTCATGGAAGAAGAGACTAGAGATCTGCATCGGAGTAGCACGTGCTCTACACTACCTTCACACTGGAGCCAATCGTTGTTGTATCATTCATCGTGACATAAAACCTCATAACATTCTATTGGATGGGAATATGGTTCCCAAAATCTCGGGTTTTGAGTTATCATTGTACGGAGCGCTCTCTGCATCAAAGGAAAAGAAAATTGAAGTAGATTGCGTTGCAGGCACAGTTGGATACATTGCTCCTGAACACATCTGGCATGGTTATGTCACTGATAAAAGTGATGTTTTCTCCTTTGGTATGGTTCTGCAATTCGTGATGGGCCACAATGTGTCGTGCTTCAAACATGATGCCGACACTCTTGAGGAGACAATAGATCCAAATCTGAATGGGAAGATTGCACCAGAATGTTGGCAGGTATTCACTAGTGTCATACAGAGATGCTTGCAGCATGAACCAGATGAGCGACCTACAATGGGCGAAGTTGAGATATTGCTTGAGAATGCTCTCTCATTGCAGGAACAAGCTGATATTACAAACACCAATGCTGCTCACTATACTTTATTATCCACTACTTGTTTGTCCCATATATTTTCACGTTGTATAAGTAATGGTCTTCTGACCTTTGATGCTTCAATGGAGGAGGAAGGCTCTTTCTCAGACGTAAGTAGTGACTAA 1092 0.402 MFLKCLRFADSKKGGKYPIVIEEQCHHFSFEALRKATNDFDEKLQIGEGGFGKFYKGCLKHNNGDASDHTIALKVMPIWMSHEYYEFKKEIEMLCELRHTNIISLIGFCYRKQKRIVVYEYMVNGSLHDYLNNKNKEPLSWKKRLEICIGVARALHYLHTGANRCCIIHRDIKPHNILLDGNMVPKISGFELSLYGALSASKEKKIEVDCVAGTVGYIAPEHIWHGYVTDKSDVFSFGMVLQFVMGHNVSCFKHDADTLEETIDPNLNGKIAPECWQVFTSVIQRCLQHEPDERPTMGEVEILLENALSLQEQADITNTNAAHYTLLSTTCLSHIFSRCISNGLLTFDASMEEEGSFSDVSSD 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02961 363 Gene3D Transferase(Phosphotransferase) domain 1 122 330 - -
Adu04g02961 363 PANTHER OS07G0166700 PROTEIN 11 328 IPR045272 GO:0004714|GO:0006468
Adu04g02961 363 Gene3D Phosphorylase Kinase; domain 1 7 121 - -
Adu04g02961 363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Adu04g02961 363 ProSiteProfiles Protein kinase domain profile. 40 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02961 363 SUPERFAMILY Protein kinase-like (PK-like) 19 300 IPR011009 -
Adu04g02961 363 PRINTS Tyrosine kinase catalytic domain signature 119 132 IPR001245 GO:0004672|GO:0006468
Adu04g02961 363 PRINTS Tyrosine kinase catalytic domain signature 161 179 IPR001245 GO:0004672|GO:0006468
Adu04g02961 363 PRINTS Tyrosine kinase catalytic domain signature 232 254 IPR001245 GO:0004672|GO:0006468
Adu04g02961 363 PRINTS Tyrosine kinase catalytic domain signature 275 297 IPR001245 GO:0004672|GO:0006468
Adu04g02961 363 SMART serkin_6 40 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02961 363 PANTHER TYROSINE KINASE FAMILY PROTEIN 11 328 - -
Adu04g02961 363 Pfam Protein tyrosine and serine/threonine kinase 45 300 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02961 Adu-Chr4 117870175 117871439 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02961 25 329 Receptor kinase-like Gene Family AT5G38990 41.975 8.63e-68 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Adu04g02961 PK_Tyr_Ser-Thr 9.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02961 - - adu:107486591 756.133