Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02956 ATGGTCCTCAAATGTTTACGCTTTGGTGATTCAAAGAAGGAGAAAAATTATCCGACGGTAATAGAAGAGCTATGCCATCAATTTTCCTTTGAAGATCTTAGAAAATCAACCAACAACTTTGACGATAAACTAGTAATTGGGTGGTTACCCTTTGGTATGGTATACAAAGGTTGGCTCAAACATAATGATGCTGCAACCGATCATACCATTACATTGAAGGTGACGGTGCCTCAATACCCCATCCAAGGTTCACTTGAATTCAAGAAGGAAATTGAGGTGCTATGTCAGCTTCGTCACCCTAATATAATCTCTATAATAGGCTTCTGCAACCAAGAAAAGGAAAAGATTGTTGTGTATGAGTACATGGCCAATGGATCACTTGGTGATTACTTGAGAGATAGGAATAGAAATAACCAACCACTGTCATGGAAGAAAAGACTAGACATCTGCATTGGAGTAGCACGTGCTCTACACTACCTTCACTCAGGAGCCAAGCGTGCTATCATTCATCGTGATATAAATCCAAGTAATATTCTTTTGGATAAGAATATGATGCCCAAACTTACAAATTTTGGGATATCATTGCAGGGAGGGCTCTCTACATTGAAGCCAATGCAAATCAAAGTAGATAAGATTGTAGGTACATCTGCATTGATGGCTCCGGAGTATGCTATACACAGTATTGTTACTTATAAATGCGATGTTTACTCCTTTGGTTTGGTTCTACTACACAAGGTAGGCCATAATGTGTTAAACTACTTAATTCAATATGAAGAGCACAAACTTGAGGAGACAATGGAACCAATTCTGAAAGGAAGGATTGCGCCAGAATGTTGGCAAGTATTCACTAGTGTCATACAAAGTTGCTTGGAGTACGAAGCAGATGAGCGACCAACAATGGGGGAAGTAGAGGTATTGCTTGAGCATGCTCTCTCATTGCAGCAATAA 948 0.3956 MVLKCLRFGDSKKEKNYPTVIEELCHQFSFEDLRKSTNNFDDKLVIGWLPFGMVYKGWLKHNDAATDHTITLKVTVPQYPIQGSLEFKKEIEVLCQLRHPNIISIIGFCNQEKEKIVVYEYMANGSLGDYLRDRNRNNQPLSWKKRLDICIGVARALHYLHSGAKRAIIHRDINPSNILLDKNMMPKLTNFGISLQGGLSTLKPMQIKVDKIVGTSALMAPEYAIHSIVTYKCDVYSFGLVLLHKVGHNVLNYLIQYEEHKLEETMEPILKGRIAPECWQVFTSVIQSCLEYEADERPTMGEVEVLLEHALSLQQ 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02956 315 Pfam Protein tyrosine and serine/threonine kinase 50 304 IPR001245 GO:0004672|GO:0006468
Adu04g02956 315 Gene3D Transferase(Phosphotransferase) domain 1 122 315 - -
Adu04g02956 315 PANTHER OS07G0166700 PROTEIN 13 314 IPR045272 GO:0004714|GO:0006468
Adu04g02956 315 Gene3D Phosphorylase Kinase; domain 1 6 121 - -
Adu04g02956 315 ProSiteProfiles Protein kinase domain profile. 40 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02956 315 PRINTS Tyrosine kinase catalytic domain signature 278 300 IPR001245 GO:0004672|GO:0006468
Adu04g02956 315 PRINTS Tyrosine kinase catalytic domain signature 233 255 IPR001245 GO:0004672|GO:0006468
Adu04g02956 315 PRINTS Tyrosine kinase catalytic domain signature 162 180 IPR001245 GO:0004672|GO:0006468
Adu04g02956 315 PRINTS Tyrosine kinase catalytic domain signature 119 132 IPR001245 GO:0004672|GO:0006468
Adu04g02956 315 PANTHER TYROSINE KINASE FAMILY PROTEIN 13 314 - -
Adu04g02956 315 SUPERFAMILY Protein kinase-like (PK-like) 16 303 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02956 Adu-Chr4 117848244 117849191 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02956 10 315 Receptor kinase-like Gene Family AT5G39000 38.154 1.90e-62 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Adu04g02956 PK_Tyr_Ser-Thr 1.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02956 - - ahf:112797914 490.345