Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02949 ATGCTTCTCAAGTGTATAAGCTTTCCTGTTTCAAAGAAGACAAGCTCATCCAAGAAGCACTCTCCAACGATTATAGAATTGTTATGCCATCAATTTTCCCTGGAAGATCTTAAAAGATCAACCAACAACTTCAACCAGAGATTAGTAGTTGGAAAAGGAGGTTTTAGCACTGTATACAAAGGATGTCTCAAACACAATGGTGGATCAGACCATACAATTGCATTAAAGCTCAAGTGTTGCAACTCCAACCAGCATTTCCTTGAGTTCATGAAGGAAATTGAGTTGCTATGCCAGCTTCATCATCCTAATTTGATCTCTCTTGTAGGATTTTGCAACCATGAAAAGAAAAAGATTATTGTGTATGAGTTCATGTGCAATGGCTCTCTTCATGATCACCTATACAATAGGGACAAGACACCACTATCATGGCAGAAAAGGCTAGAGATATGTATAGGAATCGCGCGTggactacactaccttcatgctggagccaagcgctctatctttcattgtgacataaaacctagtaacatccttttggatagcaatatggtgcctaagctctcagactttgggctttcaTTGCAGGGACCACTATCTACTTCCAAGCCAAAACCAATTGCAGTAGACTATGTTGCAGGTACATTTGGATACTTAGCCCCTGAGTGTTTCCAACGCCTGACCGTTACAGATAAATGTGACGTTTACTCGTTTGGTATGGTTCTACTTGTAATGGTATGCATGAAGGAGAAGGATTTGTTTCTTAACAAGGCCAACATGTTAGGTAACCAACATTTGGAGGGGAAGAGTGAAATCAAATACTTGGAAAAGTTCATTGATGATCAAGTTCAACCATGGAATGTAATAGCCTTTATGCAGCGATTCCCAATCGAAGAGATCATTGATCCAACGCTCAGGGGAAAGATTGTACCAGAGTGCTGGGAAGTATTCATGGATGTTACAAAAAGATGTTTGATGCATGAACCTGATGAACGACCAACAATGGGTGAAGTAGAGGTGTTGCTTGAATATGCTTTGTTATTGCAGGCACAAGCAGATATCAAAAGGAACAATGGTTCTTATTCTTTATCATCCACCACCATTATAAACTTAGGTGAAGTCATTTGTATGCATGATATTCATTTAGAAGAGGTGATATTTCATCAGTTTTCTCTAGCCGATCTTAGGCGAACAACCTTCGACTTTGAACGCAGAGTCATCGGCAGAGGAAGCTTTGGTACAGCATACAGAGGTCGTATCTTACTAAATGGAGCTACTTATCATTCAATTGCAATTAAGAAGTTGGATTGGTCATCTACATGTGATAGTGATATACAGTGGAATTTAAAAGATATTGAGAATATTTCCCAACTTCGCCATCCGAATTTGGTCTCTCTTTTTGGATTCTGTGATGAACTTGATGAGAAGATTCTTGTATACATGTATATTCCCAATGGATCTCTCCATTATCACTTAAATTGGAATGAATCAGCTCTAACATGGAAGAAAAGACTAGAAATATGCATTGGAGTAGCAGAAGGATTGAACTACCTTCACACAGCATCAATTTTTCACCATAACATAAAACTCAGCAACATCCTTTTGGATTATGATATGGTGCCCAAACTCTCAGATTTTGGGCTCCCCTGGTCCGAGAAAATTCATGCAGAAGATTATGCTGCTCCGGAGTTGTTACAAGGACATGATTTCACAGATAAATGTGATGTTTATTCCTTTGGTATAATTCTCTTAAAAATGTGTTGGGAAGTATTCTTGAATGTCATAAAATGCTGTTTGAAGTTTGAAGCAAATGAGAGACCGACAATGAATGAAGTGATAGCTCAACTTCAACATGCCCTGGCACTGCAAGAGGAAGCAGATTCCAACATAAGTGGTGATTACAACTTGTTATCTGTGACCTTTGATCCTCCGGTTGGAGGAAGCATATATTATTAA 1956 0.3635 MLLKCISFPVSKKTSSSKKHSPTIIELLCHQFSLEDLKRSTNNFNQRLVVGKGGFSTVYKGCLKHNGGSDHTIALKLKCCNSNQHFLEFMKEIELLCQLHHPNLISLVGFCNHEKKKIIVYEFMCNGSLHDHLYNRDKTPLSWQKRLEICIGIARGLHYLHAGAKRSIFHCDIKPSNILLDSNMVPKLSDFGLSLQGPLSTSKPKPIAVDYVAGTFGYLAPECFQRLTVTDKCDVYSFGMVLLVMVCMKEKDLFLNKANMLGNQHLEGKSEIKYLEKFIDDQVQPWNVIAFMQRFPIEEIIDPTLRGKIVPECWEVFMDVTKRCLMHEPDERPTMGEVEVLLEYALLLQAQADIKRNNGSYSLSSTTIINLGEVICMHDIHLEEVIFHQFSLADLRRTTFDFERRVIGRGSFGTAYRGRILLNGATYHSIAIKKLDWSSTCDSDIQWNLKDIENISQLRHPNLVSLFGFCDELDEKILVYMYIPNGSLHYHLNWNESALTWKKRLEICIGVAEGLNYLHTASIFHHNIKLSNILLDYDMVPKLSDFGLPWSEKIHAEDYAAPELLQGHDFTDKCDVYSFGIILLKMCWEVFLNVIKCCLKFEANERPTMNEVIAQLQHALALQEEADSNISGDYNLLSVTFDPPVGGSIYY 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02949 651 PANTHER TYROSINE KINASE FAMILY PROTEIN 586 638 - -
Adu04g02949 651 ProSiteProfiles Protein kinase domain profile. 401 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02949 651 PANTHER OS07G0166700 PROTEIN 586 638 IPR045272 GO:0004714|GO:0006468
Adu04g02949 651 PANTHER OS07G0166700 PROTEIN 15 364 IPR045272 GO:0004714|GO:0006468
Adu04g02949 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Adu04g02949 651 Gene3D Phosphorylase Kinase; domain 1 5 123 - -
Adu04g02949 651 Gene3D Transferase(Phosphotransferase) domain 1 124 362 - -
Adu04g02949 651 Gene3D Transferase(Phosphotransferase) domain 1 483 639 - -
Adu04g02949 651 ProSitePatterns Protein kinases ATP-binding region signature. 50 76 IPR017441 GO:0005524
Adu04g02949 651 ProSiteProfiles Protein kinase domain profile. 44 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02949 651 SUPERFAMILY Protein kinase-like (PK-like) 16 338 IPR011009 -
Adu04g02949 651 PANTHER OS07G0166700 PROTEIN 384 585 IPR045272 GO:0004714|GO:0006468
Adu04g02949 651 SMART serkin_6 44 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02949 651 SMART serkin_6 401 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02949 651 ProSitePatterns Protein kinases ATP-binding region signature. 407 434 IPR017441 GO:0005524
Adu04g02949 651 PANTHER TYROSINE KINASE FAMILY PROTEIN 15 364 - -
Adu04g02949 651 PANTHER TYROSINE KINASE FAMILY PROTEIN 384 585 - -
Adu04g02949 651 Gene3D Phosphorylase Kinase; domain 1 375 482 - -
Adu04g02949 651 Pfam Protein tyrosine and serine/threonine kinase 49 339 IPR001245 GO:0004672|GO:0006468
Adu04g02949 651 Pfam Protein tyrosine and serine/threonine kinase 405 587 IPR001245 GO:0004672|GO:0006468
Adu04g02949 651 SUPERFAMILY Protein kinase-like (PK-like) 386 619 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02949 Adu-Chr4 117783723 117785928 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02949 388 626 Receptor kinase-like Gene Family AT5G39000 35.082 5.47e-41 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Adu04g02949 PK_Tyr_Ser-Thr 7.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02949 - - adu:107486597 1314.67