Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02942 ATGGGTGTTCTTTCAGTTTTGTCTTGTTTCATTAAACCATCTTCTGATTCTAATCCAACACTCATGTCAGCAAAACCACCTTCATCCATTGTAAATGAACTTTGCCATCAGTTTTCTCTTGCAGAGATACAAGCAGCAATAGCAAGAAATCCCAACGAGTTTTCGAAACTAGGACAACCCCGTGGATTAAAGAATGTTTTCAAAGGTTATCTGCAGAATAGTAATATCCCAATTGCCATCAAGAGGTGCAGCATTGGATCATTTTCACAGCAGCTGTTCTCAGAGTTCAAGAATGAGATTGTCTTGCTTTGTCAGCTGCACCATCCTAATCTCATGCCTCTAACCGGATTCTGTATCGAAAAAAATGAGTTGATTATCGTGTATGAATACATGTCTAATGGCTCCCTTTTTGATCATCTTCATCATATAAACCATGATCCACTTTCATGGAAGAGGAGGCTTCAAATTTGCATAGGTGTGGCTCGTGGACTTCACTATCTTCACACTGGAGCCAAGCATGTTATCATCCACCACCACATTAAGACAAGTAACATTCTTTTGGATGATAACTGGGAGCCTAAAGTTTCAGGTTTGTCACTGTCCAAAAGGGTTCCTCTTAGTATCTCAAAGTCATTGATTAGAGTGGAGTCAGATGTAAAAGGAACATTTGGATATCTTGATCCAGAATATGTAAGAACCGGAGTGCTTACTGAAAGATCAGATGTATTTTCATTCTGTGTAGTTTTGTTAGAGGTTGTGAGTACAAGAACAATACAAAAGGAACGTTTGTATAACCAGATTCATTCAATGAAATCATATGCAGAGGAAATTGTTGATCCATTTCTCAAGTCAAAGATTGATCCAGATTGTTGGAGAACTTTTGTTGACATCACTGAGAGATGTTTGGCTGAAGATGGAAGGGAGAGGCCAGACATGGGGGAAGTGGAGTTGGAGCTTGAACATGCACTGCAATTGCAAGAGGAAGCTGATGCCAAGATTATTGGTTCAGAAAATTTTTATACTAAAAACAGAATATGA 1038 0.3882 MGVLSVLSCFIKPSSDSNPTLMSAKPPSSIVNELCHQFSLAEIQAAIARNPNEFSKLGQPRGLKNVFKGYLQNSNIPIAIKRCSIGSFSQQLFSEFKNEIVLLCQLHHPNLMPLTGFCIEKNELIIVYEYMSNGSLFDHLHHINHDPLSWKRRLQICIGVARGLHYLHTGAKHVIIHHHIKTSNILLDDNWEPKVSGLSLSKRVPLSISKSLIRVESDVKGTFGYLDPEYVRTGVLTERSDVFSFCVVLLEVVSTRTIQKERLYNQIHSMKSYAEEIVDPFLKSKIDPDCWRTFVDITERCLAEDGRERPDMGEVELELEHALQLQEEADAKIIGSENFYTKNRI 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02942 345 ProSiteProfiles Protein kinase domain profile. 52 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02942 345 Gene3D Phosphorylase Kinase; domain 1 15 130 - -
Adu04g02942 345 Gene3D Transferase(Phosphotransferase) domain 1 131 341 - -
Adu04g02942 345 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 24 334 - -
Adu04g02942 345 PANTHER OS07G0166700 PROTEIN 24 334 IPR045272 GO:0004714|GO:0006468
Adu04g02942 345 Pfam Protein tyrosine and serine/threonine kinase 65 316 IPR001245 GO:0004672|GO:0006468
Adu04g02942 345 SUPERFAMILY Protein kinase-like (PK-like) 65 323 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02942 Adu-Chr4 117734122 117735159 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02942 14 330 Receptor kinase-like Gene Family AT3G51550 44.479 1.28e-82 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Adu04g02942 PK_Tyr_Ser-Thr 2.8e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02942 - - adu:107486248 684.1