Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02940 ATGGGGATAATGTTTGGTAAATATTTGAGTTTCTGCCATTCAGAGCATGCAAGTTCATCTAAGAAGCCGTATCCATCAATAATTGAAGAGCTATGCCCTCAGTTTTCTCTAGAAGATCTTAGGAAATCAACCAACAACTTTGATGCAAACCATTTAACTGAAATATCAGCATATAATAGAGTATATAAATGTTTTATCAAACATAATGGTGCAAGTGATTTCACAGTGGCATTGAAGAGGTTGAATCGCGAGACCGACCTATGGAAGTTCAAGAAGGAAATCGAGTTCCACTTCCAACTTCACCATCCAAATTTAGTCTCCCTTATAGGATTCTGCAACCACAAAGATGAGAAGATTCTTGTGTACGAACACATGTCCAATGGCTCTCTCTATGATTACATATATTCCAAGAATATAGAAGATTTGTCATGGAAGAAATTGTTAGAAATATGCATTGGAGCAGCAAAAGGACTACCCTATCTTCACACAGGAACCAAGTGCCCCATCTTTCACTGTGACATGAAGCCTCATAACATTCTTTTGGACAAGAACATGGTACCTAAAATCTCACATCTTGGATTTTCCTTGCAGGGGCCACCTTTGAATTCAAAACCAAAACCAGTAAAAGTTGACAAGGTTATGGGTTCAGCTGGTTACATAGCACCTGAGCATGTCCTAACCAGAATCTTCACAGATAAATGTGATGTTTATTCATTTGGTGTGGTCCTAATAGAAGTTGTATCCACTACTTACAAGCACACCATCTTTGACAAAATCATCATGTTGGAGAGCTCATCAGATTTCTCTCTAGATCCATTTGATTTAATGAATCCATTTGTGGATATATCTGAAATGTTGGAGAGATTCTCAGTTGATGAGATTATTGATCCAATTCTGATGAGAAAGATAGCACCAGAATGTTTGGCAGTATTCATAGATGTCACAAAAAGATGCTTGAGCAGAGAAGCAAATGAAAGACCAAATATAGGTGAAGTAGAGGTTGAACTGGAGCTAGCACTAGCTTTGCAAGAGGAGGCCGATGACCGGAATCATGGTGGTGGCTGGTGA 1068 0.3867 MGIMFGKYLSFCHSEHASSSKKPYPSIIEELCPQFSLEDLRKSTNNFDANHLTEISAYNRVYKCFIKHNGASDFTVALKRLNRETDLWKFKKEIEFHFQLHHPNLVSLIGFCNHKDEKILVYEHMSNGSLYDYIYSKNIEDLSWKKLLEICIGAAKGLPYLHTGTKCPIFHCDMKPHNILLDKNMVPKISHLGFSLQGPPLNSKPKPVKVDKVMGSAGYIAPEHVLTRIFTDKCDVYSFGVVLIEVVSTTYKHTIFDKIIMLESSSDFSLDPFDLMNPFVDISEMLERFSVDEIIDPILMRKIAPECLAVFIDVTKRCLSREANERPNIGEVEVELELALALQEEADDRNHGGGW 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02940 355 ProSiteProfiles Protein kinase domain profile. 47 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02940 355 PANTHER OS07G0166700 PROTEIN 18 351 IPR045272 GO:0004714|GO:0006468
Adu04g02940 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Adu04g02940 355 Gene3D Transferase(Phosphotransferase) domain 1 125 352 - -
Adu04g02940 355 SUPERFAMILY Protein kinase-like (PK-like) 21 336 IPR011009 -
Adu04g02940 355 Pfam Protein tyrosine and serine/threonine kinase 57 333 IPR001245 GO:0004672|GO:0006468
Adu04g02940 355 PANTHER TYROSINE KINASE FAMILY PROTEIN 18 351 - -
Adu04g02940 355 Gene3D Phosphorylase Kinase; domain 1 8 124 - -
Adu04g02940 355 SMART serkin_6 47 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02940 Adu-Chr4 117729570 117732077 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02940 9 352 Receptor kinase-like Gene Family AT3G51550 36.544 3.54e-62 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Adu04g02940 PK_Tyr_Ser-Thr 9.2e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02940 - - ahf:112797906 482.641