Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02938 ATGATATTATTGTTATTCTTATTAGTTCTTCACCAACAATACTATTTCATCAAACCTATATACTCCTATTCTCGTGTAGAAGATTTAGCAATCAACTGTGGCACTGAATCAAACTCTACTATTGCAGCTAATAAGCGAATTTGGATTGGAGATGCTACCAATTCGAAACACTTTTCTGTCTTAGAATCATCACCACAGAAGAATCAATCTTCAATATCTGTTACTACTCCTCATCATGATCATCCTTATGGCACAGCAAGAATCTCTCGCTATGAATTCACATATTCATTTCATGGTGTCACTCCTGGTCACAAGTTCATTAAGCTTCACTTCAACCCTGCTTCATACAAATCATACCCCAATTTCCATCCTTCTAAGTCCATGTTTTCTGTGAAAGCAGGACCTTATACTCTTCTCAGGGACTTCAATGCTTCAGGTGCTGCTCAAGAACACCGAGATCATCATCATCATAGTGATCCAAACAAGATTCTACTTATTGAGTATCAGCACTGCATAAAAGTTGAACCAGGTCAGAATCTAACCTTGACCTTCATCCCAAACACCACTCATAAAGATTCTTATGCCTTTGTTAATGGGATTGAGGTCATGTCTTTGTTCAAGTACCATGATCAATGCAACAAGCAAAAGGAATCGAGGTTCAGATTTTCTGAGGTAGTTCATCATGAAGAGTCATGCATGAATTGTTCACCATCAGCACAACCACCACCATCGCAGCCACAAAAGCCTGCAATATCTGGTGTTGTTCTTTACTGTGTCATTGCAGTTTCTGTTTTCATTTCGATGTCTTCTATTTTCCTCTTATGTATCTGGGTTTGGAGAAACTCTAGAATGAAGCACAAGGCCAAGATGGAATTGATCTATGAAGAGACAACAAATTCAAGAAAATCATCAATAACCCTGGCCTCAGGGAACTCATGTCGTTGCTTCTCAATCATTGAGATAAGTGCAGCCACCATCAACTTCGATGACATCTTTGTTGTTGGTGTTGGAGGTTTTGGCAAAGTTTACAAAGGCTATATCGATGATGGCACGAAGCCTATCGCCATCAAGCGTTTCATCCCTGAAAATGGTGTGCAAGGTGTTCAAGAGTTCAAGAACGAGGTTGAGATGTTGTCTCAACTTAGCCACCCTCATTTGGTGCCTTTGATTGGTTATTGCAACGACGAAGACGACATGATAATCGTCTATGATTTCATGGCGAATGGGACCCTCCGGGATCATCTGTATGGGACTTGTAATGCACCTCTTTCATGGAAGCAAAGACTTAAGATATGCATAGGGGCAGGGCTaggattggaatatctccacagtggagcaaaattcaagatcattcatcgtgatgtgaagacatcaaatatcttgttggatgaggaatgggtggctaaggtttctgattttgggttgtccaaaaTTGGACCAAATGGGGAGTCAAAGTTTCATGTTAGCACAGAGGTTAAGGGTAGTCTTGGATATTTAGACCCTGAATACTCAAAGACTAAGAGGTTGACTCATAAATCTGATGTGTATTCTTTTGGTGTGGTGTTGCTTGAGGTGTTGTGTGGTAGGGCACCTTTGCTTAGAAAAGTTGAGGGACCAAAGAGGTGCCTTGTGGAATGGGCAAGGTCATGCCAAAGTGAGGGACCCCATGCCATTGACCAAATGGTTGATCCGTTTATTAGGGGCAAGATTGTCCAAGAATGTTTGAGCAAGTTTGTTGAGATGGCACTGAATTGTGTTGTTCATGAAGGAAATCAGAGACCATCAATGGGACAAGTGGTGGAGGGACTTGAACTTGCCTTGCAGCTTCAACTAAGATCAGAAGACTGA 1848 0.3858 MILLLFLLVLHQQYYFIKPIYSYSRVEDLAINCGTESNSTIAANKRIWIGDATNSKHFSVLESSPQKNQSSISVTTPHHDHPYGTARISRYEFTYSFHGVTPGHKFIKLHFNPASYKSYPNFHPSKSMFSVKAGPYTLLRDFNASGAAQEHRDHHHHSDPNKILLIEYQHCIKVEPGQNLTLTFIPNTTHKDSYAFVNGIEVMSLFKYHDQCNKQKESRFRFSEVVHHEESCMNCSPSAQPPPSQPQKPAISGVVLYCVIAVSVFISMSSIFLLCIWVWRNSRMKHKAKMELIYEETTNSRKSSITLASGNSCRCFSIIEISAATINFDDIFVVGVGGFGKVYKGYIDDGTKPIAIKRFIPENGVQGVQEFKNEVEMLSQLSHPHLVPLIGYCNDEDDMIIVYDFMANGTLRDHLYGTCNAPLSWKQRLKICIGAGLGLEYLHSGAKFKIIHRDVKTSNILLDEEWVAKVSDFGLSKIGPNGESKFHVSTEVKGSLGYLDPEYSKTKRLTHKSDVYSFGVVLLEVLCGRAPLLRKVEGPKRCLVEWARSCQSEGPHAIDQMVDPFIRGKIVQECLSKFVEMALNCVVHEGNQRPSMGQVVEGLELALQLQLRSED 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02938 615 ProSitePatterns Serine/Threonine protein kinases active-site signature. 450 462 IPR008271 GO:0004672|GO:0006468
Adu04g02938 615 SMART serkin_6 328 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02938 615 ProSiteProfiles Protein kinase domain profile. 328 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02938 615 Pfam Protein tyrosine and serine/threonine kinase 334 602 IPR001245 GO:0004672|GO:0006468
Adu04g02938 615 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 275 613 - -
Adu04g02938 615 ProSitePatterns Protein kinases ATP-binding region signature. 334 357 IPR017441 GO:0005524
Adu04g02938 615 PANTHER OS07G0166700 PROTEIN 275 613 IPR045272 GO:0004714|GO:0006468
Adu04g02938 615 Pfam Malectin domain 28 151 IPR021720 -
Adu04g02938 615 CDD STKc_IRAK 343 604 - -
Adu04g02938 615 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 27 211 - -
Adu04g02938 615 SUPERFAMILY Protein kinase-like (PK-like) 304 607 IPR011009 -
Adu04g02938 615 PANTHER OS07G0166700 PROTEIN 27 211 IPR045272 GO:0004714|GO:0006468
Adu04g02938 615 Gene3D Phosphorylase Kinase; domain 1 287 405 - -
Adu04g02938 615 Gene3D - 29 205 - -
Adu04g02938 615 Gene3D Transferase(Phosphotransferase) domain 1 406 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02938 Adu-Chr4 117723183 117725030 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02938 298 615 Receptor kinase-like Gene Family AT3G51550 59.119 4.15e-118 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Adu04g02938 PK_Tyr_Ser-Thr 1.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02938 - - adu:107486605 1235.71