Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02929 ATGAATAACAGTAATAGTCCAAAAGACCCATCAGATTTTCCACTAAAACAAGAGAGTAGTGATCATCATCAACATGAAAAggcatcatcatcagcagcagcagcagcagcaaaggcttcttcatcaTCATCATCATCACAATGGCTAAGGTTGAAGGATCCAAGAATTGTTAGGGTATCAAGAGCATTTGGAGGAAAAGACAGGCACAGCAAGGTTTGCACAATAAGAGGGTTGAGAGACAGGCGTGTGAGGCTTTCAGTTCCAACAGCAATTCAGCTCTATGATCTTCAAGATAGGTTAGGGCTTAATCAACCTAGTAAGGTTGTTGATTGGTTGTTAAATGCTGCTAAGCATGAAATTGATGAGCTTCCACCTTTGCCACATATCAATAATCCCTTCACTAACCTTAGTGGTTTTCCATCATCATCTTCTAATTCTATGATCAATACTAATGAAGCTAGCACCTCAATGTTCAATATCAATAGGAGCATTCATCAGTGGCAAGGTTTAGCACAGAATTATTCTAAGTGGAATAATAACAAGTCAAAGTCATCATCATCTACTAAACAAGCTTCATCAGAAGATAATAATCAAATGGTTACTGAAGAGGATAACAATAACAAGGAAGAGGAGGAAGGTGAAGAAGAAGGTGCTAATGTTGTTTCTACAACAAATCATCATCATCATCCTTCATTCCTAGGTTTGCTGAATACTATGCCAATTGGTAACTACCAATTTGAGCAACATAACTCATCAAATGATGTTAATGTTGCTCAATTGGGAAACCATAATCATGGGTTTATTACAAACCAAACAGATTTGCAAAGCATTAATGTTGTGCCTTTTCCATCAACATTGTCCTTATCAACTGGTGGGAACAATATAACACAGTCATACTTCCCTTCACATTCATCAGAAGCAATGGATCCAAGACAAGAACAACAAATCAATCATCATCATCATCAGTATCATCAGATGTTGACCTCTCATCATCTTCATCAAAATCTCTTGACAAATAATCTTCCATCTTTCAGCTTGGCTATGATGAGCACTCCAATCCTTCTCCACCATTCTCACAACACAAGAGAAAGTAGTAGTCATCAATCTCATCACAAAGATCACCATTTTCCTTCTTCCAAGTGA 1143 0.3561 MNNSNSPKDPSDFPLKQESSDHHQHEKASSSAAAAAAKASSSSSSSQWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAKHEIDELPPLPHINNPFTNLSGFPSSSSNSMINTNEASTSMFNINRSIHQWQGLAQNYSKWNNNKSKSSSSTKQASSEDNNQMVTEEDNNNKEEEEGEEEGANVVSTTNHHHHPSFLGLLNTMPIGNYQFEQHNSSNDVNVAQLGNHNHGFITNQTDLQSINVVPFPSTLSLSTGGNNITQSYFPSHSSEAMDPRQEQQINHHHHQYHQMLTSHHLHQNLLTNNLPSFSLAMMSTPILLHHSHNTRESSSHQSHHKDHHFPSSK 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02929 380 MobiDBLite consensus disorder prediction 360 380 - -
Adu04g02929 380 Pfam TCP family transcription factor 65 211 IPR017887 -
Adu04g02929 380 ProSiteProfiles TCP domain profile. 65 123 IPR017887 -
Adu04g02929 380 MobiDBLite consensus disorder prediction 1 46 - -
Adu04g02929 380 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 17 372 IPR005333 GO:0003700
Adu04g02929 380 MobiDBLite consensus disorder prediction 359 380 - -
Adu04g02929 380 PANTHER TRANSCRIPTION FACTOR TCP2-LIKE 17 372 - -
Adu04g02929 380 MobiDBLite consensus disorder prediction 176 232 - -
Adu04g02929 380 MobiDBLite consensus disorder prediction 176 200 - -
Adu04g02929 380 MobiDBLite consensus disorder prediction 14 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02929 Adu-Chr4 117582327 117584857 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02929 16 312 TCP Transcription Factor Family AT3G02150 40.317 9.31e-50 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Adu04g02929 TCP 5.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02929 - - gmx:100816424 275.404