Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02925 ATGGAGGATGAAACTCGTGATGAACTTGGTGCAGAGTTTCACAAGAAGTTGGATTTGAAGGATGAGGATGAAAGAGTAGCTGAAAATGAGAAGAAAGATTCGGACTTTGTAGCTGGTAGTAGAGAATATGGTAGTGAGGAATTGGATGGTGAAGGTGGTTGTGCCCCGAAAACAAGTGAAGCACAAGGGAGTGATGATAATGATGGATGGGATGATGATGAGGGTTATGGCTGGAATGAGAATGTGAAAGAGAGTGAGGTTGATAAGGTAAGTGGAGATTTTGATGTTGATGGTGATGGTAATGGTGATGATGAAGTTGAAGTTGAAGGCGATAAAGGAGTGGAGAAGAAGAAAGATAGAAGCAGTGGTAGAGTTCAACAGCAATATCCACTGAGGCCTGATGTTGAAGATTGTGCTTTCTATCTTAAAACTAGAACTTGCAAATTTGGATTCAATTGCAAGTTTAATCACCCACTTGGTAAGAGGAAGAACCAGCTGAATAATCACTGGCTTGCCCTTCATCTCCAAACATTGCTTCAGAGCATCAATGGAATCTCCGTTAAATCACAATGGTGGACCACAACTATGGGACGAAGGAGAAGGGAAGAAGAGATACTACATATAATAATCATTCTTAGCTTGTAA 645 0.4078 MEDETRDELGAEFHKKLDLKDEDERVAENEKKDSDFVAGSREYGSEELDGEGGCAPKTSEAQGSDDNDGWDDDEGYGWNENVKESEVDKVSGDFDVDGDGNGDDEVEVEGDKGVEKKKDRSSGRVQQQYPLRPDVEDCAFYLKTRTCKFGFNCKFNHPLGKRKNQLNNHWLALHLQTLLQSINGISVKSQWWTTTMGRRRREEEILHIIIILSL 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02925 214 PANTHER PROTEIN PHOSPHATASE RELATED 6 165 - -
Adu04g02925 214 MobiDBLite consensus disorder prediction 1 126 - -
Adu04g02925 214 PANTHER TRANSCRIPTION FACTOR C3H FAMILY-RELATED 6 165 - -
Adu04g02925 214 MobiDBLite consensus disorder prediction 7 48 - -
Adu04g02925 214 ProSiteProfiles Zinc finger C3H1-type profile. 132 160 IPR000571 GO:0046872
Adu04g02925 214 SUPERFAMILY CCCH zinc finger 132 161 IPR036855 GO:0046872
Adu04g02925 214 MobiDBLite consensus disorder prediction 76 96 - -
Adu04g02925 214 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 134 158 IPR000571 GO:0046872
Adu04g02925 214 MobiDBLite consensus disorder prediction 107 123 - -
Adu04g02925 214 Gene3D - 106 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02925 Adu-Chr4 117536784 117538774 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02925 129 195 C2H2 Transcription Factor Family AT5G16540 38.571 2.60e-08 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Adu04g02925 zf-CCCH 6.5e-08 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02925 - - adu:110280340 281.952