LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu04g02912	ATGGATGAACAACATCATAAAAGGATCTTTGTTGTTCTTCATCAAGTGGTGGTGATTTTGTTGGTGATGGTGGTGGTGGTGGGACCAAGTAGTTGTGTTAAAGGAGGAGAAGAAGAAGATAGGATCTTGGAACTTCCTGGTCAACCAAAGGTGTCTTTTCAACAGTTTTCTGGCTATGTTACTGTCAACAAGGTTGCCGGTAGAGCACTCTTCTACTGGCTCACTGAATCTTCTCAAAACTCACTCAGAAAACCCCTTGTTATTTGGCTCAATGGAGGTCCCGGTTGTTCATCAGTAGCATATGGAGCTTCTGAAGAGATTGGCCCATTCAGAGTAAATAGGTCTGCTTCAGGACTATACATTAACAAGTTTTCATGGAACTCACTCGCTAACCTCCTATTCCTCGAAACCCCCGCCGGCGTCGGCTTCTCATACACCAACCGCTCCTCCGACCTACATGACACCGGCGACCGCCGCACCGCAAAAGACTCTCTGGAATTTGTAGTCCAATGGCTAGAAAGGTTCCCACGCTATAAAAATAGGGAGCTTTACATCACTGGAGAGAGCTATGCTGGCCATTATGTGCCTCAACTAGCTAGAGAAATTATCACTTATAACACCAACACTAAGTATCCCATCAATCTCAAAGGAATCATGGTTGGAAATGCAGTAACAGACAACTATTATGACAACTTAGGAACAGTGACATATTGGTGGAGCCATGCAATGATCTCTGACCAGACTTACAGGCAACTCATAAGCACTTGTGACTTCCACAGGCAGAAGGAATCTGATGAGTGTGAGTCTCTATATAGTTATGCCATGGATCAAGAATTCGGAAACATTGATCAGTACAACATCTATGCACCTCCTTGTAACAACTCCGACGGCAGCGCCGCCACCTCCCGCCGTGCCATGCGCCTACCCCATCGCCCCCATCATCCGGCAGTCAGGCAATTGTCCGGGTATGATCCATGTACGGAAAAGTATGCAGAGATATACTACAATAGACCAGATGTTCAGAAAGCACTTCATGCTAACACTACTGGAATTCCTTATAAGTGGACTGCTTGCAGTGAGGTTTTGAATCGAAACTGGAATGATACAGATGTATCAGTGCTACCAATTTATAGACAGTTGATGGCCAACAGAATACGAGTTTGGGTGTTCAGTGGAGACGTAGATTCAGTGGTGCCGGTTACAGCAACTAGATATGCACTTGCACAGCTTAAGGTGGCAACTAAAATACCATGGTATCCTTGGTATGTCAAAAATCAGGTTGGAGGGTGGACTGAAGTATATGAAGGGCTAACATTTGCGACAGTGAGAGGGGCAGGTCATGAAGTTCCATTATTCAAGCCAAGAGCAGCTCTTCAGTTATTTAAATCATTTCTTTCAGGAAGTCCTCTCCCTAAGTCCTAA	1422	0.4501	MDEQHHKRIFVVLHQVVVILLVMVVVVGPSSCVKGGEEEDRILELPGQPKVSFQQFSGYVTVNKVAGRALFYWLTESSQNSLRKPLVIWLNGGPGCSSVAYGASEEIGPFRVNRSASGLYINKFSWNSLANLLFLETPAGVGFSYTNRSSDLHDTGDRRTAKDSLEFVVQWLERFPRYKNRELYITGESYAGHYVPQLAREIITYNTNTKYPINLKGIMVGNAVTDNYYDNLGTVTYWWSHAMISDQTYRQLISTCDFHRQKESDECESLYSYAMDQEFGNIDQYNIYAPPCNNSDGSAATSRRAMRLPHRPHHPAVRQLSGYDPCTEKYAEIYYNRPDVQKALHANTTGIPYKWTACSEVLNRNWNDTDVSVLPIYRQLMANRIRVWVFSGDVDSVVPVTATRYALAQLKVATKIPWYPWYVKNQVGGWTEVYEGLTFATVRGAGHEVPLFKPRAALQLFKSFLSGSPLPKS	473

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu04g02912	473	ProSitePatterns	Serine carboxypeptidases, serine active site.	185	192	IPR018202	GO:0004185
	Adu04g02912	473	Gene3D	alpha/beta hydrolase	36	294	IPR029058	-
	Adu04g02912	473	SUPERFAMILY	alpha/beta-Hydrolases	44	471	IPR029058	-
	Adu04g02912	473	Gene3D	-	326	363	-	-
	Adu04g02912	473	PRINTS	Carboxypeptidase C serine protease (S10) family signature	122	134	IPR001563	GO:0004185\|GO:0006508
	Adu04g02912	473	PRINTS	Carboxypeptidase C serine protease (S10) family signature	135	145	IPR001563	GO:0004185\|GO:0006508
	Adu04g02912	473	PRINTS	Carboxypeptidase C serine protease (S10) family signature	171	196	IPR001563	GO:0004185\|GO:0006508
	Adu04g02912	473	PRINTS	Carboxypeptidase C serine protease (S10) family signature	437	450	IPR001563	GO:0004185\|GO:0006508
	Adu04g02912	473	ProSitePatterns	Serine carboxypeptidases, histidine active site.	437	454	IPR033124	GO:0004185
	Adu04g02912	473	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	17	472	IPR001563	GO:0004185\|GO:0006508
	Adu04g02912	473	Gene3D	-	373	467	-	-
	Adu04g02912	473	Pfam	Serine carboxypeptidase	47	467	IPR001563	GO:0004185\|GO:0006508
	Adu04g02912	473	PANTHER	SERINE CARBOXYPEPTIDASE-LIKE 25	17	472	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu04g02912	Adu-Chr4	117292034	117300910	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu04g02912	331	470	Calmodulin-binding Proteins	AT2G22960	31.915	3.36e-16	75.1

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu04g02912	K16297		-	gmx:100807680	827.394