Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02910 ATGGCGTTCCTCAATAGAATGGGAAGCCTACTGAAGCAATCTGCTGTCAGGCACATCAATCAAGAGTTGTCTGGATCAAAACCTTCGATTTTCCAGGCTATTCGATCCATGTCATCTTCAAAGCTTTTCATCGGAGGTATTTCATATAGCACAGATGAGATGAGTCTGCGGGAGGCTTTTGCACGCTATGGAGAAGTAGTTGATGCAAGGGTCATTATGGACCGTGAAACTGGAAGGTCCAGAGGTTTTGGATTCATAACTTTTGCAACAACTGAGGATGCATCTTCTGCCATTCAAGCCATGGATGGCCAGGATCTTCATGGTCGGAGAATACGTGTGAACTATGCTGCAGAAAAATCACGTCCAGGATTCGGCGGTGGTGGCGGCTATGGAGGTGGTGGCTATGGAGGTGGTGGCTATGGCGGTGGTGGTGGCTATGGAGGTGGTGGCTATGGCGGTGGTAATTTCGGTGGTAATGATAATAGTGGTGGAAGTTATGGAGGTGGTGGATATGGTGCCCCAGCAAGCTATGGCAGTGGCAGCACTCAAACTAGTTTCGCAGATAGCGGTGCTAGTAATTTCCAATTCAATGATAACTCTGGCGGAGATCTTCCCTCTGGTGGAGGCAATACGGGTTTGGGATTTGATCATGAGTTTGATGAACAAAAGGACAGAACAGATGGGGAGTTTCAAGACAACAATCTGAGGGAAAACAATGATGAATCCAGTGATATCGCACAGAACCGTGGGTGA 753 0.4768 MAFLNRMGSLLKQSAVRHINQELSGSKPSIFQAIRSMSSSKLFIGGISYSTDEMSLREAFARYGEVVDARVIMDRETGRSRGFGFITFATTEDASSAIQAMDGQDLHGRRIRVNYAAEKSRPGFGGGGGYGGGGYGGGGYGGGGGYGGGGYGGGNFGGNDNSGGSYGGGGYGAPASYGSGSTQTSFADSGASNFQFNDNSGGDLPSGGGNTGLGFDHEFDEQKDRTDGEFQDNNLRENNDESSDIAQNRG 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02910 250 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 40 118 IPR000504 GO:0003723
Adu04g02910 250 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 42 112 IPR000504 GO:0003723
Adu04g02910 250 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 3 MITOCHONDRIAL 1 217 - -
Adu04g02910 250 MobiDBLite consensus disorder prediction 176 250 - -
Adu04g02910 250 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 1 217 - -
Adu04g02910 250 MobiDBLite consensus disorder prediction 176 206 - -
Adu04g02910 250 SMART rrm1_1 41 114 IPR000504 GO:0003723
Adu04g02910 250 Gene3D - 19 154 IPR012677 -
Adu04g02910 250 MobiDBLite consensus disorder prediction 216 244 - -
Adu04g02910 250 SUPERFAMILY RNA-binding domain, RBD 30 150 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02910 Adu-Chr4 117274833 117277780 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02910 31 119 Eukaryotic Initiation Factors Gene Family AT3G16380 39.326 2.20e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02910 K12741 - gmx:100807155 241.121