Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02903 ATGGTTCGATTAATTGAAACAGCATCAGTGCCAATTTTGGCAATTAATGTTGATGGGATGGTCAATGGATGGAACACGAAGATTGTTGAGTTGACAGGCCTTTCAGTTGAGGAAGCTATTGGAAAGGATTTACTTATGCTGGTTGAGGATTTTTCAGCAGAGAGAGTCAAGAAGATGCTGGACATGGCACTGCAGGCATTCTCTCTCATAAGCACGGCTAGCTATGAAAATGTTGCCAAGAAATGGATTCCTGAGTTGAGGCATTATGCTCCTGGTGTTCCAATTATTCTTGTTGGAACAAAACTTGATCTTCGGGATGATAAGCAGTTTTTTCAAGATCATCCTGGTGCAGCACCTATCACCACAGTGCAGAGTGACGAACTGAGAAAACTTATCGGTGCTCCAGTTTACATCGAATGTAGTTCAAAAACACAGCAGAATGTGAAGGCTGCTTTTGATGCGGCCATCAAAGTAGTTCTCCAGCCTCCAAAGCAGAAGAAAAAGAAGAGAAAGGGTCAAAAAACCTGTTCTATATTCATAACACATGATGGTGTTGGTGTTCCGAAAACATTACTGAACCAAATGTTCGGACGAGAGGGACAAGAATCCGAGGAGGGTATTAGTCTGCTCATCAGCAGAAAGTTGCTGAAGCTGATGAATGGAGACGTGCGGTATCTGAGGGAAGCTGGCAAATCATCTTTCATCTTAACAGTTGAACTAGCTGCTTCCCAGAAATTGATTGCTTAA 747 0.4257 MVRLIETASVPILAINVDGMVNGWNTKIVELTGLSVEEAIGKDLLMLVEDFSAERVKKMLDMALQAFSLISTASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFQDHPGAAPITTVQSDELRKLIGAPVYIECSSKTQQNVKAAFDAAIKVVLQPPKQKKKKRKGQKTCSIFITHDGVGVPKTLLNQMFGREGQESEEGISLLISRKLLKLMNGDVRYLREAGKSSFILTVELAASQKLIA 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02903 248 Pfam Ras family 61 160 IPR001806 GO:0003924|GO:0005525
Adu04g02903 248 SUPERFAMILY PYP-like sensor domain (PAS domain) 3 65 IPR035965 -
Adu04g02903 248 TIGRFAM sensory_box: PAS domain S-box protein 4 64 IPR000014 -
Adu04g02903 248 CDD PAS 8 72 IPR000014 -
Adu04g02903 248 ProSiteProfiles small GTPase Rho family profile. 1 159 - -
Adu04g02903 248 SMART rho_sub_3 39 162 IPR001806 GO:0003924|GO:0005525
Adu04g02903 248 Pfam PAS fold 1 60 IPR013767 GO:0006355
Adu04g02903 248 Gene3D - 14 165 IPR027417 -
Adu04g02903 248 PANTHER SMALL GTPASE SUPERFAMILY, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 58 178 - -
Adu04g02903 248 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 167 IPR027417 -
Adu04g02903 248 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 151 240 IPR003594 -
Adu04g02903 248 ProSiteProfiles PAS repeat profile. 1 67 IPR000014 -
Adu04g02903 248 SMART rab_sub_5 47 162 - -
Adu04g02903 248 ProSiteProfiles small GTPase Rab1 family profile. 1 194 - -
Adu04g02903 248 PRINTS Transforming protein P21 ras signature 91 104 - -
Adu04g02903 248 PRINTS Transforming protein P21 ras signature 137 159 - -
Adu04g02903 248 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 171 237 IPR036890 -
Adu04g02903 248 SMART pas_2 1 65 IPR000014 -
Adu04g02903 248 PANTHER RHO FAMILY GTPASE 58 178 IPR003578 GO:0005525|GO:0007264
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02903 Adu-Chr4 117196715 117198667 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02903 1 66 Histidine Kinase Gene Family AT1G09570 72.727 3.88e-24 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02903 K04392 - gmx:100785464 202.986