Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02873 ATGCCCAGCTTCTCCTCTCTCTCTGGGTGTATTGCTCGACTATTCAACTCTGAATCCCACAATTCAAGCGGCTCCAACAGAGGAGATAGTACTACCAGCAGCGATACTGTGGCTGATGACAATCCTGTCGCAGGACCCGTGGAGTGTTACGCCTGCACGCAAGTAGGCGTGCCGGTGTTTCACTCCACCAGTTGCGACGGCTTTCACCAGCCACAATGGGAGGCTTGTGCGGGATCCTCCCTAGTCCCAATCCAGAATCGGTCTAAAAAAGCTCCGACTGTTCGGACAAGAATTCAGTCGGGGCCTTTTGGACAAGTTCTGGACCCGAGGAGCAAGCGTGTGCAAGTATGGAACCGGGCTCTATTGCTAGCGCGTGGAGTGGCGCTGGCAATTGACCCGTTGTTCTTCTACGCGCTCTCCATTGGGAGGGAAGGGTCGCCGTGCCTTTACATGGATGGAGGCCTGGCGGCGATGGTGACGGTGGTGCGGACGTGTGTGGACGCGGTGCATCTATTCCACGTGTGGCTGCAGTTCAAGGTGGCGTATGTTTCGAGGGAGTCGATGGTTGTCGGGTGCGGGAAGCTTGTATGGGACGCGCGTGCAATCGCGTCGCACTACCTGCGATCGATGAAGGGGTTTTGGTTCGATGCCTTTGTAATTCTGCCAGTTCCGCAGGCTGTGTTTTGGTTGATAGTACCAAAATTGATAAGAGAAGAGAAAATCAAGGTCATTATGACCATATTGCTCTTAATTTTCTTGTTCCAATTTCTCCCTAAGGTTTACCATAGCATCTGCATGATGAGAAGAATGCAGAAAGTCACAGGATACATCTTTGGAACCATTTGGTGGGGTTTTGGCCTTAATCTCATAGCCTACTTCATTGCTTCACATGTAGCTGGAGGGTGCTGGTATGTTCTTGCGATTCAACGAGTGGCGTCGTGCATCCGGCAACAATGCGAAAGAACAATGGGATGCAACCTGTCTCTGTCCTGCTCTGAGGAGGTATGCTACCAGTTTCTGTTGTCATCATCAGGGACAGTTGGAGGTTCATGTAATAATGGAAATGGAAACTCAACAACAGTTGTGGTTAGAAAGCCTTTGTGTTTAGATGTTGATGGCCCTTTCAGATATGGAATCTACCAATGGGCACTTCCTGTTATTTCAAGCAATTCTCTGGCTGTCAAGATTCTGTATCCCATTTTTTGGGGTTTGATGACACTTAGCACTTTTGGTAATGATCTTGAGCCAACAAGTAACTGGCTAGAAGTGATTTTCAGTATCTGCATTGTACTCAGTGGATTACTGCTATTCACTTTGTTGATTGGTAACATTCAGGTGTTTTTGCATGCTGTGATGGCGAAGAAGAGAAAGATGCAGCTGAGGTGTCGCGACATGGAATGGTGGATGAGGAGGAGGCAGCTGCCTTCGCGATTAAGGCAAAGAGTTCGCCATTTCGAACGCCAGAGATGGGCAGCAATGGGAGGAGAAGATGAGATGGAATTGATCAAAGACTTGCCGGAGGGGCTAAGGCGAGACATCAAGCGCTATCTTTGCTACGACCTTATTAAAAAGGTACCTCTGTTCCACAATTTGGATGATCTTATACTAGACAACATATGTGACAGGGTTAAGCCTCTAGTCTTCTCTAAAGATGAAAAGATAATTAGAGAAGGTGATCCAGTACCAAGGATGGTGTTCATCGTCCGAGGGCGAATAAAGCGCAACCAAAGCCTCAGCAAAGGAATGGTAGCATCTAGCATCCTTGAACCAGGAGGCTTTCTAGGGGATGAGCTTCTTTCATGGTGCCTTAGGCGGCCGTTCATCGACCGGCTTCCGGCTTCCTCGGCCACATTTGTGAGCCTTGAACCAACAGAAGCCTTTGGCCTTGATTGCAATCATCTTAGGTACATCACTGATCACTTCAGATACAAGTTTGCCAATGAGAGGCTGAAGCGAACGGCGAGGTACTACTCATCCAATTGGAGAACTTGGGCTGCTGTCAACATTCAATTCGCCTGGCGGCGTTACAGGCAGAGGACTAGAGGTCCGGTGACCCCTGTAAGGGACAATGGTGGCGGAGGCGGCACGGAGCGCAGGCTCTTGCAGTATGCTGCAATGTTCATGTCAATAAGGCCACATGACCATCTTGAATGA 2154 0.4921 MPSFSSLSGCIARLFNSESHNSSGSNRGDSTTSSDTVADDNPVAGPVECYACTQVGVPVFHSTSCDGFHQPQWEACAGSSLVPIQNRSKKAPTVRTRIQSGPFGQVLDPRSKRVQVWNRALLLARGVALAIDPLFFYALSIGREGSPCLYMDGGLAAMVTVVRTCVDAVHLFHVWLQFKVAYVSRESMVVGCGKLVWDARAIASHYLRSMKGFWFDAFVILPVPQAVFWLIVPKLIREEKIKVIMTILLLIFLFQFLPKVYHSICMMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCIRQQCERTMGCNLSLSCSEEVCYQFLLSSSGTVGGSCNNGNGNSTTVVVRKPLCLDVDGPFRYGIYQWALPVISSNSLAVKILYPIFWGLMTLSTFGNDLEPTSNWLEVIFSICIVLSGLLLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMRRRQLPSRLRQRVRHFERQRWAAMGGEDEMELIKDLPEGLRRDIKRYLCYDLIKKVPLFHNLDDLILDNICDRVKPLVFSKDEKIIREGDPVPRMVFIVRGRIKRNQSLSKGMVASSILEPGGFLGDELLSWCLRRPFIDRLPASSATFVSLEPTEAFGLDCNHLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRQRTRGPVTPVRDNGGGGGTERRLLQYAAMFMSIRPHDHLE 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02873 717 Pfam Ion transport protein 115 445 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Adu04g02873 717 Gene3D Helix hairpin bin 453 518 - -
Adu04g02873 717 ProSiteProfiles cAMP/cGMP binding motif profile. 527 637 IPR000595 -
Adu04g02873 717 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 2-LIKE 48 717 - -
Adu04g02873 717 SUPERFAMILY cAMP-binding domain-like 454 641 IPR018490 -
Adu04g02873 717 MobiDBLite consensus disorder prediction 19 38 - -
Adu04g02873 717 Gene3D Jelly Rolls 525 643 IPR014710 -
Adu04g02873 717 SUPERFAMILY Voltage-gated potassium channels 108 448 - -
Adu04g02873 717 CDD CAP_ED 527 637 IPR000595 -
Adu04g02873 717 Gene3D - 148 450 - -
Adu04g02873 717 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 48 717 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02873 Adu-Chr4 116758515 116765897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02873 40 717 Ion Channels AT5G15410 80.000 0.0 1068
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02873 K05391 - gmx:100798823 1203.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g02873 04 116758515 116765897 Adu04g02873 04 116758515 116765897 ECH