Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02863 ATGGCAGCCAGCACTACTTTCTCTCTCTGTTTTGCTGCTGCTGCTGCTGCTTCTTCTTCTTCTTGTTGTAATCATAATTCTAATCCTTTAACGCCATTGAATCAGAGGCCGAGGCCTTTGGGAATAGCGAATCGCTTCGTTTCGTCTTCCGTGGCTGCGCCTTTGTCTTCTGTGTGCTTCGGTGCTTCTGCTTCTGTATTCAGCTCCAAAGCTAGGATTTTCACGGCGTTAGCAGCGGTCGTCGATGAAGAGACGGCGGTTGCGGAACGGGAGCGTGGTTTGGCGGAAAATGATGGTTCCGACGAGGAAGAGCAGTGGAAGATGCCGAGAGCGACGGAGGTTTACGTCTGCAACCTTCCAAGGAGCTGTGACACCGAACAGCTACGTCAGATGTTCGAGCCTCACGGAACTATTCTATCCGCTGAGGTTTGCCGGAATGCGGATACTGGTGAGAGTAGAGGATGTGCTTATGTGACATTGTCATCTGTTGCCTCAGCAAGAAATGCAGTCACTGCCTTGGATGGATCGGATGTTGGTGGACGGGAGATGCGGGTTAGATTCTCAGTTGAGATGAATCCCCAGAGGAGGAACCTTGAGACTGCGAATGCTTCACCAAAGAGAGTTGTATACTATGAAGCTCCTCATAAGTTGTACGTTGGGAATCTTGCTAGGGCAGTTAGACCTGAAGAGTTGAGACATCTTTTTAGCAAATTCGGCAATGTGGCTAGTGTAAGATTGTTGAAAGATCAGAAACAAGGGCGAACCCGAGTTTATGCGTTTCTCTCTTTCCTATCGGAGAAAGAACGTGATGCTGCATTGACCCTGAATGGAGCGGAACTTTGTGGTCGGACGTTGGTGGTTAGAGTGGGTATAGACAAGGGTGAAGCTTAA 891 0.4916 MAASTTFSLCFAAAAAASSSSCCNHNSNPLTPLNQRPRPLGIANRFVSSSVAAPLSSVCFGASASVFSSKARIFTALAAVVDEETAVAERERGLAENDGSDEEEQWKMPRATEVYVCNLPRSCDTEQLRQMFEPHGTILSAEVCRNADTGESRGCAYVTLSSVASARNAVTALDGSDVGGREMRVRFSVEMNPQRRNLETANASPKRVVYYEAPHKLYVGNLARAVRPEELRHLFSKFGNVASVRLLKDQKQGRTRVYAFLSFLSEKERDAALTLNGAELCGRTLVVRVGIDKGEA 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02863 296 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 215 292 IPR000504 GO:0003723
Adu04g02863 296 SMART rrm1_1 216 288 IPR000504 GO:0003723
Adu04g02863 296 SMART rrm1_1 113 186 IPR000504 GO:0003723
Adu04g02863 296 Gene3D - 78 199 IPR012677 -
Adu04g02863 296 Gene3D - 200 296 IPR012677 -
Adu04g02863 296 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 40 294 - -
Adu04g02863 296 PANTHER OS02G0815200 PROTEIN 40 294 - -
Adu04g02863 296 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 114 184 IPR000504 GO:0003723
Adu04g02863 296 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 217 285 IPR000504 GO:0003723
Adu04g02863 296 SUPERFAMILY RNA-binding domain, RBD 214 294 IPR035979 GO:0003676
Adu04g02863 296 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 112 190 IPR000504 GO:0003723
Adu04g02863 296 CDD RRM_SF 217 288 - -
Adu04g02863 296 SUPERFAMILY RNA-binding domain, RBD 108 197 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02863 Adu-Chr4 116612010 116614020 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02863 114 287 Eukaryotic Initiation Factors Gene Family AT1G22760 29.143 3.94e-14 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02863 - - adu:107486682 531.946