Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02856 ATGTCCACCACCGACGCCAATTCAGCGGCGGCGCCGCCGCAGTCATCTCGGCCAACCATAACCCTCCCTCCTCGACCCTCCGCCGAGGCCTTCTTCTCCGGCGCCGGCGCTGGCATCAGTCCAGGCCCCATGACTCTCGTCTCCAGCTTCTTCTCTGATGGCGGCGGTTCTGACTCCGACTACCGCTCCTTCTCTCAGCTTCTCGCCGGCGCCATGGCGTCCCCGCTTGCCTTTGGCGGTGCTTCCAGGCCTCCCTTTCCGCCCCCCGAGAATCCCGGCGAGAATTCCGGTGAGGAAGGAGCGCAGAAGAGCTTAGGGTTCAAGCAGAGTAGGCCCATGAACTTGGTGGTTGCTCGTTCTCCAATGTTCACTATCCCTCCAGGGTTGAGTCCTTCTGGGTTTCTTAATTCGCCGGGATTCTTTTCCCCTCAGAGCCCCTTTGGGATGTCGCACCAACAAGCTTTAGCACAGGTTACTGCTCAAGCTGTGTTTGCTCAATCTCAAATGCATATGCAAGCTGACTATCAGGCGCCTGCAGTAACAGCTCCGACAGCTCCCGCAAATCCATCAGTAGAGCAGCCATCTTTTACTCAAAATGAAGCTTCGCAGCAACAAGTGGTACCGTCTGTATCAGAACCCAGCAATGCTCAAGTGGAAACATCAGATATTTCAAACACTGATAATAAGAAATTTCAACCATCTTCCATGGTCATTGACAAACCTGCAGATGATGGTTACAACTGGCGTAAGTATGGGCAGAAGCAGGTTAAGGGGAGCGAGTTTCCACGGAGCTACTACAAGTGTACGCATTTGAATTGCCCTGTTAAGAAAAAGGTTGAGCGTGCCCCCGATGGTCACATAACTGAAATTATCTATAAAGGCCAGCATAACCATGAAAAGCCTCAGGCAAATAGGCGTGTAAAAGAAAATAATGATTCAAATGGAAATTCAAATGTTCCACCTAAGTCTGAGTTGAATTCTCAGGGTTGGGTTGGAAATGCAACTAAGGTTGCAGAAAGCATACCTGATTGTTCGGTTCCTGAGAGCGACCAGACCTCCAATCAAGGGGCAAGTAGGTTACCTGGATCAAGTGAGAGTGAGGAAGTGGGTAATGTAGATAATAGGGAAGAGGGAGATGATGGTGAGCCTAACCCTAAGAGAAGGAACACTGATGTTGCGGTTTCTGAAGTACCTCTATCGCAGAAAACCGTTACAGAACCCAAAATCATCGTGCAAACAAGAAGTGAAGTTGATCTTTTGGATGATGGCTACAGGTGGCGAAAGTATGGTCAGAAAGTAGTAAAGGGAAATCCTCATCCAAGGAGTTACTACAAATGCACTAGTGCAGGATGCAATGTGCGAAAGCACGTTGAGAGAGCTTCGTCAGACCCCAAAGCCGTCATAACTACTTACGAGGGAAAACATAATCACGATGTACCTGCTGCTAGAAGCAGTAGCCACAACACAGCGAGTAACAATTCAGTGCCTCTGAAACCGCATAACCCGGTGCCACAGAAGCATCCTCTACTTAAAGACATGGATTTCGGAAGCAATGACCAAAGACCGGTACATCTGCGTTTAAAAGAAGAACAAATCATAGTGTAA 1605 0.4922 MSTTDANSAAAPPQSSRPTITLPPRPSAEAFFSGAGAGISPGPMTLVSSFFSDGGGSDSDYRSFSQLLAGAMASPLAFGGASRPPFPPPENPGENSGEEGAQKSLGFKQSRPMNLVVARSPMFTIPPGLSPSGFLNSPGFFSPQSPFGMSHQQALAQVTAQAVFAQSQMHMQADYQAPAVTAPTAPANPSVEQPSFTQNEASQQQVVPSVSEPSNAQVETSDISNTDNKKFQPSSMVIDKPADDGYNWRKYGQKQVKGSEFPRSYYKCTHLNCPVKKKVERAPDGHITEIIYKGQHNHEKPQANRRVKENNDSNGNSNVPPKSELNSQGWVGNATKVAESIPDCSVPESDQTSNQGASRLPGSSESEEVGNVDNREEGDDGEPNPKRRNTDVAVSEVPLSQKTVTEPKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPHPRSYYKCTSAGCNVRKHVERASSDPKAVITTYEGKHNHDVPAARSSSHNTASNNSVPLKPHNPVPQKHPLLKDMDFGSNDQRPVHLRLKEEQIIV 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02856 534 MobiDBLite consensus disorder prediction 308 328 - -
Adu04g02856 534 MobiDBLite consensus disorder prediction 291 328 - -
Adu04g02856 534 Gene3D WRKY domain 405 481 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu04g02856 534 Gene3D WRKY domain 228 302 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu04g02856 534 ProSiteProfiles WRKY domain profile. 415 480 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu04g02856 534 MobiDBLite consensus disorder prediction 1 16 - -
Adu04g02856 534 MobiDBLite consensus disorder prediction 182 247 - -
Adu04g02856 534 SMART WRKY_cls 242 300 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu04g02856 534 SMART WRKY_cls 420 479 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu04g02856 534 MobiDBLite consensus disorder prediction 345 368 - -
Adu04g02856 534 ProSiteProfiles WRKY domain profile. 243 301 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu04g02856 534 SUPERFAMILY WRKY DNA-binding domain 240 301 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu04g02856 534 SUPERFAMILY WRKY DNA-binding domain 412 480 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu04g02856 534 PANTHER WRKY PROTEIN 12 533 - -
Adu04g02856 534 MobiDBLite consensus disorder prediction 482 499 - -
Adu04g02856 534 MobiDBLite consensus disorder prediction 1 36 - -
Adu04g02856 534 MobiDBLite consensus disorder prediction 291 307 - -
Adu04g02856 534 MobiDBLite consensus disorder prediction 186 233 - -
Adu04g02856 534 MobiDBLite consensus disorder prediction 343 400 - -
Adu04g02856 534 Pfam WRKY DNA -binding domain 243 299 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu04g02856 534 Pfam WRKY DNA -binding domain 421 477 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu04g02856 534 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 12 533 IPR044810 GO:0003700
Adu04g02856 534 MobiDBLite consensus disorder prediction 477 519 - -
Adu04g02856 534 MobiDBLite consensus disorder prediction 79 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02856 Adu-Chr4 116548813 116553389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02856 16 532 WRKY Transcription Factor Family AT2G03340 53.832 4.83e-155 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Adu04g02856 WRKY 9.6e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02856 - - aip:107635357 1014.22