Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02850 ATGGATGGAGGCCGCGGTGCTACCGGTGTGGATATGTTTCTTCCAAATTATAAACTTGGAAAAACACTTGGCATTGGATCCTTTGGCAAGGTGAAAATTGCAGAACATGTATTGACCGGTCATAAAGTTGCCATTAAGATTCTTAACCGTAGGAAGATAAAGAACATGGAAATGGAAGAAAAAGTGAGAAGAGAAATCAAAATTTTAAGACTGTTCATGCATCCTCACATTATTCGGCTTTATGAGGTTGTAGAAACTCCAACTGACATCTACGTTGTGATGGAATATGTGAAATCTGGAGAGCTCTTTGACTACATAGTAGAAAAGGGCAGGTTGCCAGAGGATGAAGCCCGCAATTTTTTTCAGCAGATAATCTCTGGTGTGGAGTACTGTCACAGAAATATGGTGGTTCATAGAGACTTGAAGCCAGAGAATTTACTTTTGGACTCCAGGCGCAATGTCAAGATAGCAGATTTTGGCTTGAGCAACATCATGAGGGATGGTCACTTTCTTAAGACAAGCTGTGGAAGCCCTAACTATGCAGCTCCGGAGGTTATCTCTGGGAAATTGTATGCTGGACCTGAAGTAGATGTTTGGAGCTGTGGTGTAATTCTCTATGCCCTTCTTTGTGGCACCCTTCCTTTTGATGATGAAAACATACCTAATCTCTTCAAGAAAATAAAGGGCGGGATATACACTCTTCCTAGTCATCTCTCACCTGGTGCTAGAGATTTGATACCAAGGATGCTTGTGGTTGATCCTATGAAGAGGATGACCATACCTGAGATCCGTCAACACCCATGGTTCCAGGCTCGTCTTCCTCGTTATTTAGCTGTGCCACCACCAGATACAATGCAACAAGCAAAAAAGATTGATGAGGAGATCCTTCAGGAAGTAGTGAATATGGGATTTGACAGGAATCAGTTGGTTGAATCACTTCGCAACAGGATGCAAAATGAGGGTACTGTAGCATACTATTTGTTATTGGACAACAGATTCCGTGTTTCCAGTGGCTATCTTGGAGCTGAGTTTCAAGAGTCAATGGATTCTGGTTTTAACCAAATGCATCCCAGTGAAGTTGTTTCTCCAGTTCTTGGGCACCGCATTTCCAGCTATATGGATAACCCAGGTGTAGGATTGAGACCACAGTTGCCAGTTGAGAGAAAATGGGCACTTGGGCTTCAGTCTCGTGCCCACCCTCGTGAAATAATGACCGAGGTTCTCAAAGCCCTTCAAGAATTACATGTTTGTTGGAAGAAGATTGGGCACTACAACATGAGTGCAGGTAATCTACTCGAGAACCATGATCTCTACTTTATTTGTCATCATATCGGGTAA 1338 0.4283 MDGGRGATGVDMFLPNYKLGKTLGIGSFGKVKIAEHVLTGHKVAIKILNRRKIKNMEMEEKVRREIKILRLFMHPHIIRLYEVVETPTDIYVVMEYVKSGELFDYIVEKGRLPEDEARNFFQQIISGVEYCHRNMVVHRDLKPENLLLDSRRNVKIADFGLSNIMRDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLVVDPMKRMTIPEIRQHPWFQARLPRYLAVPPPDTMQQAKKIDEEILQEVVNMGFDRNQLVESLRNRMQNEGTVAYYLLLDNRFRVSSGYLGAEFQESMDSGFNQMHPSEVVSPVLGHRISSYMDNPGVGLRPQLPVERKWALGLQSRAHPREIMTEVLKALQELHVCWKKIGHYNMSAGNLLENHDLYFICHHIG 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02850 445 SMART serkin_6 17 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02850 445 SUPERFAMILY Protein kinase-like (PK-like) 14 286 IPR011009 -
Adu04g02850 445 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 7 428 - -
Adu04g02850 445 CDD STKc_AMPK_alpha 14 269 - -
Adu04g02850 445 CDD UBA_SnRK1_plant 291 331 - -
Adu04g02850 445 SUPERFAMILY KA1-like 326 428 IPR028375 -
Adu04g02850 445 ProSiteProfiles Protein kinase domain profile. 17 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02850 445 Gene3D Kinase associated domain 1, KA1 382 438 - -
Adu04g02850 445 SMART uba_6 292 329 IPR015940 -
Adu04g02850 445 Pfam UBA/TS-N domain 291 327 IPR015940 -
Adu04g02850 445 Gene3D Transferase(Phosphotransferase) domain 1 8 347 - -
Adu04g02850 445 Pfam Protein kinase domain 17 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02850 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Adu04g02850 445 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 290 330 IPR015940 -
Adu04g02850 445 SUPERFAMILY UBA-like 279 328 IPR009060 GO:0005515
Adu04g02850 445 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524
Adu04g02850 445 PANTHER SERINE/THREONINE KINASE 7 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02850 Adu-Chr4 116507521 116513270 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02850 17 269 CBL-interacting serine-threonine protein kinases AT4G24400 52.756 2.21e-94 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Adu04g02850 Pkinase 4.3e-81 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02850 K07198 - gmx:100796687 807.364