Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02849 ATGGCAAGGAAGAGAAAGGTTGCTGAAGCAATTGAAGAAGAAAACATGGAATCATGGCATGAAATGATCAAAGAAGGTGGAGCATTAGGAGAATCTACAAGAAGATCAAGAAAGAGGTTTGTTGGTGTGAGACAAAGGCCATCAGGAAGATGGGTGGCTGAGATCAAAGATACCATTCAGAAGATCAGGGTTTGGTTAGGAACTTTTGATACTGCTGAAGAAGCTGCAAGAGCCTATGATGAAGCAGCTTGGATCCTCCGCGGATCCAATACTCGAACCAACTTCAATCCTTGCTATCCTCGTTCCTCTTCAAATCCTGCTCTTTCCTCAAAGATTGCAAATCTCCTCCTTCAAAGGCTTAAAGCAAAGAATAATATCATCTCTTGTTCTAATCTTAGTACTACTCACCAACAAGATCATCAAGCTGATGTGTATGGAGCAGAGTCGAAAGCTTTCTCGATTGATCAATTCGCAGATTTCCTTTATGATCCTGAAGCTTGTAGCGCAAGCAACAACAAATTTAGTGATAATATTGAACAAATTGCTTGCATCACTAGTAGTTTCGAATCGTGTTTAACAGAGAAAGATGCAAAAAGGGATAAAGAAATGGATGCAACACAAACATCAAGCATTGACTCGAATTCAAGAGTGAAAAATGAGGAAGAAATCGAAGAAGAAGAAGAAGGTTTGATTGTTGAGGATTTCAGGTTCTTGGATGAGAATTCTATTGTTTCATCAAGTTACTGTTATTCTCCTTTTGAGATTGTTGAAGAGATGGAGGAGCCTGTGGAGGCAGAGAACTATGATGGTGATGATGAGCCTTCAATGATGAAAGCTATAATGAACAGAATGAAGTATGAGAGAAAGTTCTCAGCTTCTCTCTATGCCTTCAATGGGATACATGATTATGAGTGCTTGAAGTTGAAGCTTCAGTCAGGGAACATAAAGAGTAGAACAGGAATTTCAGATCAAATTAGCAAACTTAACAAGGCTTGCAGCAAGAACAAAAATGAGGTTAATAAGGAGGAAGATGAAAAGGAAAAGGAGAAGGAATCCATTGATGGAGATTTGTTGTTTTGGAACTCCCTTAATCTCCCTAATATTTTCTAA 1110 0.3874 MARKRKVAEAIEEENMESWHEMIKEGGALGESTRRSRKRFVGVRQRPSGRWVAEIKDTIQKIRVWLGTFDTAEEAARAYDEAAWILRGSNTRTNFNPCYPRSSSNPALSSKIANLLLQRLKAKNNIISCSNLSTTHQQDHQADVYGAESKAFSIDQFADFLYDPEACSASNNKFSDNIEQIACITSSFESCLTEKDAKRDKEMDATQTSSIDSNSRVKNEEEIEEEEEGLIVEDFRFLDENSIVSSSYCYSPFEIVEEMEEPVEAENYDGDDEPSMMKAIMNRMKYERKFSASLYAFNGIHDYECLKLKLQSGNIKSRTGISDQISKLNKACSKNKNEVNKEEDEKEKEKESIDGDLLFWNSLNLPNIF 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02849 369 CDD AP2 38 95 IPR001471 GO:0003700|GO:0006355
Adu04g02849 369 SUPERFAMILY DNA-binding domain 39 96 IPR016177 GO:0003677
Adu04g02849 369 Pfam AP2 domain 39 83 IPR001471 GO:0003700|GO:0006355
Adu04g02849 369 ProSiteProfiles AP2/ERF domain profile. 39 96 IPR001471 GO:0003700|GO:0006355
Adu04g02849 369 MobiDBLite consensus disorder prediction 197 225 - -
Adu04g02849 369 PRINTS Ethylene responsive element binding protein signature 40 51 IPR001471 GO:0003700|GO:0006355
Adu04g02849 369 PRINTS Ethylene responsive element binding protein signature 62 78 IPR001471 GO:0003700|GO:0006355
Adu04g02849 369 PANTHER AP2/ERF DOMAIN TRANSCRIPTION FACTOR 11 327 - -
Adu04g02849 369 Gene3D AP2/ERF domain 38 97 IPR036955 GO:0003700|GO:0006355
Adu04g02849 369 Coils Coil 325 352 - -
Adu04g02849 369 SMART rav1_2 39 102 IPR001471 GO:0003700|GO:0006355
Adu04g02849 369 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 11 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02849 Adu-Chr4 116505570 116506732 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02849 31 116 AP2-EREBP Transcription Factor Family AT5G19790 69.767 3.02e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Adu04g02849 AP2 5.6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02849 K09286 - gmx:100786711 372.859