Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02841 ATGGAATCAATGGAGAATGTTAGAATGCAAAGAGAGAAAGATCAGAAGTTCGAATTGCCGTCCGGCTTTCGATTTCATCCCACCGATGTAGAGCTCATAAATTACTACCTTGTTAAGAAGGTTCTTGATGATAAGCACTTCTGTTCTATAGCAATTGCTGATGCTGATATGAACAAGTCTGAGCCATGGGATTTACCCGGTTTAGCGAAAATGGGCGAAACAGAATGGTATTTTTTTAGTATGAAGGATAGAAAATACCCAACTGGCCAAAGGACTAATAGGGCGACCGAGGCCGGATATTGGAAGGCCACAGGCAAAGACAAGGAGATATCAAAGGAGAATTCAAAGATTGGGATGAAGAAGACCCTTGTTTTCTACAAAGGAAGAGCTCCAAGAGGTGAAAAGACTAATTGGGTCATGCATGAATATAGATTGGAAGGGAACAAATCTGTTTATAATCTGTCACAACCTGAAAGAGGTGAATGGGTTATATGCAGAGTATTTGAGAAGGGCAATAATGGAAAAAGACTGAATATTGCAAAGTTGGAGAGGCTCAACTCTTCGGGAAAGGAACCATTACCATTGCCAAAACCTACTCCTTTGATGCCTCCATTGATGGATTCTTCATCATCGAGAACCACCCCCGGCGAGTTATCTCAGGCGACGTGCTACTCCTCGGATCCAAATCAAGCCGATGTCCAGAACAATTTGCATGATGACATAGTTGAAAGCAGGGAAACTCCTATCTTGAACTTTTCCCCTGCTTCCATCAATGAAGAATTAATTCAGATTCCAAACCAAATTGAGAATCCGGATTATTATACTCTGCCTCAAGAAAACAACGGATCAATTGCAAGGCAGAATCAGAAATCAGAGTTTGATGCTGATATATCATCTTTGATTTACAACAATGACATGTTTTACAGGTTCTTTGGGAACCAAGAACATTCATCTTCAGCTTCCGCAGACATTTGCAACCTATGGAATTACTAG 993 0.4089 MESMENVRMQREKDQKFELPSGFRFHPTDVELINYYLVKKVLDDKHFCSIAIADADMNKSEPWDLPGLAKMGETEWYFFSMKDRKYPTGQRTNRATEAGYWKATGKDKEISKENSKIGMKKTLVFYKGRAPRGEKTNWVMHEYRLEGNKSVYNLSQPERGEWVICRVFEKGNNGKRLNIAKLERLNSSGKEPLPLPKPTPLMPPLMDSSSSRTTPGELSQATCYSSDPNQADVQNNLHDDIVESRETPILNFSPASINEELIQIPNQIENPDYYTLPQENNGSIARQNQKSEFDADISSLIYNNDMFYRFFGNQEHSSSASADICNLWNY 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02841 330 SUPERFAMILY NAC domain 15 170 IPR036093 GO:0003677|GO:0006355
Adu04g02841 330 MobiDBLite consensus disorder prediction 204 233 - -
Adu04g02841 330 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 323 - -
Adu04g02841 330 ProSiteProfiles NAC domain profile. 19 170 IPR003441 GO:0003677|GO:0006355
Adu04g02841 330 Gene3D NAC domain 28 175 IPR036093 GO:0003677|GO:0006355
Adu04g02841 330 Pfam No apical meristem (NAM) protein 20 145 IPR003441 GO:0003677|GO:0006355
Adu04g02841 330 MobiDBLite consensus disorder prediction 187 233 - -
Adu04g02841 330 PANTHER ANAC079/ANAC080/ATNAC4 PROTEIN 3 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02841 Adu-Chr4 116429927 116431611 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02841 18 330 NAC Transcription Factor Family AT5G07680 45.593 3.40e-81 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Adu04g02841 NAM 7.3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02841 - - gmx:100782172 405.216