Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02819 ATGGAGGGGATGTTGAGCCTCAACACTGAAGCAAGTAATGATGCAAATCCCAAGCAACAATCCTCTTCTCTTGCAAATTTTGCAAAGAATTATCCTCCTAGCTTTCCTAGAAAGGTATTGGCAGAGATAATAGGGACATATTTATTGGTGTTTGTGGGAAGTGGTTCAGCTGGACTTAGTGCCATTGATGAAAACAAGGTATCAAAATTGGGAGCTTCACTTGCAGGAGGATTCATTGTAACGGTTATGATCTACTCCATTGGACACATCTCCGGGGCACATATGAATCCAGCTGTTTCCTTAGCTTTTGCCTCCATCAACCGTTTTCCTTGGAAGCAGGTACCATTTTATATTGCAGCCCAACTAACAGGAGCAATATGTGCTTCATACACACTGAGGGTGTTGCTAGAACCAGCAACACAAATTGGTGCCACGTCACCCTCAGGGTCAAACATTCAAGCACTTGTCATGGAAATTGTTGCCACATTCACTATGGTCTTCATATCCGCTGCTGTTGCCACTGACCCTAAAGCTATTGGAGAACTATCAGGGGTAGCAGTAGGTTCTTCAGTTAGCATAGCTAGCATTGTAGCTGGACCAATATCAGGGGGGTCAATGAACCCAGCAAGGTCATTAGGTCCTGCAATTGCCACTGCATCTTATAAGAGTATTTGGGTCTATTTTGTTGGACCAATCATTGGGGCACTCTTAGGGGTATGGTCCTACACTGTGGTTCAAGACATAGATAATAATAATAAGCCACCTCCTTCTTCTTCCCTTTCATCAATATTGGGCCAGAGAATTATTAGTAGTGAAGCTGAGCATGTTGCTAACAAATATCACTTCAGTTCTGTGTGA 858 0.4324 MEGMLSLNTEASNDANPKQQSSSLANFAKNYPPSFPRKVLAEIIGTYLLVFVGSGSAGLSAIDENKVSKLGASLAGGFIVTVMIYSIGHISGAHMNPAVSLAFASINRFPWKQVPFYIAAQLTGAICASYTLRVLLEPATQIGATSPSGSNIQALVMEIVATFTMVFISAAVATDPKAIGELSGVAVGSSVSIASIVAGPISGGSMNPARSLGPAIATASYKSIWVYFVGPIIGALLGVWSYTVVQDIDNNNKPPPSSSLSSILGQRIISSEAEHVANKYHFSSV 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02819 285 Gene3D Glycerol uptake facilitator protein. 5 255 IPR023271 -
Adu04g02819 285 PANTHER AQUAPORIN NIP2-1 14 251 IPR034294 -
Adu04g02819 285 PRINTS Major intrinsic protein family signature 37 56 IPR000425 GO:0015267|GO:0016020|GO:0055085
Adu04g02819 285 PRINTS Major intrinsic protein family signature 76 100 IPR000425 GO:0015267|GO:0016020|GO:0055085
Adu04g02819 285 PRINTS Major intrinsic protein family signature 113 132 IPR000425 GO:0015267|GO:0016020|GO:0055085
Adu04g02819 285 PRINTS Major intrinsic protein family signature 157 175 IPR000425 GO:0015267|GO:0016020|GO:0055085
Adu04g02819 285 PRINTS Major intrinsic protein family signature 188 210 IPR000425 GO:0015267|GO:0016020|GO:0055085
Adu04g02819 285 PRINTS Major intrinsic protein family signature 225 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Adu04g02819 285 SUPERFAMILY Aquaporin-like 32 247 IPR023271 -
Adu04g02819 285 ProSitePatterns MIP family signature. 94 102 IPR022357 -
Adu04g02819 285 TIGRFAM MIP: MIP family channel proteins 41 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Adu04g02819 285 CDD MIP 37 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Adu04g02819 285 Pfam Major intrinsic protein 34 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Adu04g02819 285 PANTHER MAJOR INTRINSIC PROTEIN, AQUAPORIN-LIKE PROTEIN-RELATED 14 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02819 Adu-Chr4 116160592 116163906 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02819 37 250 Major Intrinsic Protein MIP AT5G37820 50.000 2.23e-68 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02819 K09874 - gmx:100795261 337.806