Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02813 ATGAGGAGGTACAATCTGAGGAGCAGTGATTCATCAAGGAACCAAGAAAGCAATGATTATTCAAGAGACGTAAGAACGTATGTGAGATACGGAGAGTGTGAGAAGAACCAAGCAGAGCGCATCGGAGGCCACGCCGTCGACGGTTGCAGAGAGTTCATGGCTAGCGGAGCTGAAGGAACACCTCAAGCTCTCACTTGTGCCGCTTGTGGCTGCAACAGAAGCTTCCATAAGCTTGAACTTCGAACGGAGGTTGTTGCCAACCATGGCCGCCATGGTCAAAGCTTACATGGACAGCGCTGA 300 0.51 MRRYNLRSSDSSRNQESNDYSRDVRTYVRYGECEKNQAERIGGHAVDGCREFMASGAEGTPQALTCAACGCNRSFHKLELRTEVVANHGRHGQSLHGQR 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02813 99 PANTHER MINI ZINC FINGER PROTEIN 1 12 88 - -
Adu04g02813 99 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 29 79 IPR006456 -
Adu04g02813 99 Pfam ZF-HD protein dimerisation region 28 79 IPR006456 -
Adu04g02813 99 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 12 88 - -
Adu04g02813 99 MobiDBLite consensus disorder prediction 1 21 - -
Adu04g02813 99 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 30 79 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02813 Adu-Chr4 116081518 116082094 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02813 24 87 Zinc finger-homeobox gene family AT3G28917 72.308 5.04e-26 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Adu04g02813 ZF-HD_dimer 1.4e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02813 - - ahf:112740680 207.994