Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02812 ATGAAAAAGTATTACATAAAGAATAACGACCAACCTAATTCTTCCTCTTCCTCCGCCTCCTCCTCGGCCATCAGGATTTATGTGACATACGGCGAGTGCCAAAGGAACCAAGCCGAGTGGCTCGGAGGACACGCGGTTGACGGTTGTCAAGCTTTCATGCCAAGCGGAGAAGAAGGAACACCAGAAGCTCTCTCATGTGCCGCTTGTAACTGCCATAGGAGCTTCCACAAGCTTGAAGTGCATGCTGAAGGCGAAGACAGTAATGACCTTCCTCCACCACAAAGGAGCTAG 291 0.5017 MKKYYIKNNDQPNSSSSSASSSAIRIYVTYGECQRNQAEWLGGHAVDGCQAFMPSGEEGTPEALSCAACNCHRSFHKLEVHAEGEDSNDLPPPQRS 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02812 96 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 29 79 IPR006456 -
Adu04g02812 96 MobiDBLite consensus disorder prediction 7 21 - -
Adu04g02812 96 MobiDBLite consensus disorder prediction 1 21 - -
Adu04g02812 96 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 30 79 IPR006456 -
Adu04g02812 96 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 5 7 82 - -
Adu04g02812 96 Pfam ZF-HD protein dimerisation region 28 79 IPR006456 -
Adu04g02812 96 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 7 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02812 Adu-Chr4 116065826 116066285 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02812 28 92 Zinc finger-homeobox gene family AT3G28917 59.091 1.95e-22 82.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Adu04g02812 ZF-HD_dimer 3.5e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02812 - - ahf:112740679 192.586