Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02810 ATGGGAAGACCACCATGTTGTGATAAAGAAGGTGTGAAGAAGGGTCCTTGGACTCCTGAAGAAGATATCATTTTGGTCTCTTATATCCAAGAACATGGTCCTGGCAATTGGAGGGCTGTTCCTACCAACACAGGGTTATCAAGATGTAGCAAGAGTTGTAGACTTAGATGGACTAATTACTTGAGGCCTGGAATCAAAAGGGGTAACTTCACTGAACAAGAAGAAAAGATGATTATCCATCTTCAAGATCTCTTAGGAAACAGATGGGCTGCAATTGCTTCATACCTACCACAAAGGACGGATAATGATATAAAGAATTATTGGAACACGCATCTGAAGAAGAAGCTCAAGAAGTTGCAAGCTTCAAGTTCTGGAGTTTGCAACTTCGACGAAACCGGAACTGGAACCGGAGCGAGTTATTCCGGTTCGATTCCGGTTCGAGGCCAGTGGGAGCGAAGGCTCCAAACCGATATCCACATGGCGAAAAGAGCCCTCAGTGAAGCCCTTTCACCGGAGAACAATAATAATAATAATAATTTTTGTTCTTCATCTTCAACAAAAGCGATTACACAATCATCATCTTTGTGCTATGCTTCAAGTGCTGAGAACATAGCACGTTTGTTGAAGGGTTGGATGAAGAATCCAGCAACAAATAACAAGTGTTCGAGAACAAGCTCTTCATCTTTGACTACTCAAAACAACACTTTCTTTGTTGTTAATGGTGGTGACACAGCTTCAAAGGGATCAGGAGGAGGAAGCAGTAGCAATGATAACAGTGTTGAGTTGTCTGAAACCTTTGATTCCTTGTTTGGTTTGGAGTCTTTGGATTACTCATCAAACGCTACTACTACAACCACTACAACTACCACTACCACTTCAGATCATGAACATGACCAGTTTTCTCATCAATCTTTGTCTCCTAATGATGAGAACAATGTTTTTCAAGAAAATGAAAGCAAGCCTGAGATTATTGAAGATGTCATGCCATTCTCTTTGCTTGAGAAGTGGCTTCTTGAAGAGGTTGCTTGCCAAGATCAGAAAGTTATTACTACCGACGCCAAGTTCTTCTAG 1071 0.4136 MGRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLSRCSKSCRLRWTNYLRPGIKRGNFTEQEEKMIIHLQDLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKLQASSSGVCNFDETGTGTGASYSGSIPVRGQWERRLQTDIHMAKRALSEALSPENNNNNNNFCSSSSTKAITQSSSLCYASSAENIARLLKGWMKNPATNNKCSRTSSSSLTTQNNTFFVVNGGDTASKGSGGGSSSNDNSVELSETFDSLFGLESLDYSSNATTTTTTTTTTTSDHEHDQFSHQSLSPNDENNVFQENESKPEIIEDVMPFSLLEKWLLEEVACQDQKVITTDAKFF 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02810 356 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 349 - -
Adu04g02810 356 CDD SANT 16 61 IPR001005 -
Adu04g02810 356 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Adu04g02810 356 Gene3D - 13 66 - -
Adu04g02810 356 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Adu04g02810 356 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Adu04g02810 356 PANTHER TRANSCRIPTION FACTOR MYB-HB-LIKE FAMILY-RELATED 1 349 - -
Adu04g02810 356 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Adu04g02810 356 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Adu04g02810 356 SMART sant 66 114 IPR001005 -
Adu04g02810 356 SMART sant 13 63 IPR001005 -
Adu04g02810 356 CDD SANT 69 111 IPR001005 -
Adu04g02810 356 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Adu04g02810 356 MobiDBLite consensus disorder prediction 281 313 - -
Adu04g02810 356 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Adu04g02810 356 MobiDBLite consensus disorder prediction 241 260 - -
Adu04g02810 356 Gene3D - 69 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02810 Adu-Chr4 116025206 116026502 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02810 1 340 MYB Transcription Factor Family AT5G62470 47.769 4.66e-100 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu04g02810 Myb_DNA-binding 1.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02810 K09422 - gmx:780543 392.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g02319 10 98304518 98306291 Adu04g02810 04 116025206 116026502 PCT