Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02802 ATGGCATTCCCACCACCACCCTCTTCACAAAGTGCTAATAATTTCATCTTCCACAATCATGAACACCAACCAGATCATCATCATCATCATCATCACCAACCCTTCTCTTCTAACTCCCTCAATTCCTTCCCCTCTTTGCCAATTCCTTCCCATCACCACTTCTTAGGTCAACCACACAACACACCCTCTCTCTTTCTCAAGATGGGTTCACACCAATTCTTAGGGGGTGGTGGACCTCTCATGTTGAAAAGATCCATGTCATTTTCAGGGATCGAGAACAAGTGCGGCGGCGACGGCGACGACGACCTATCGGATGACGGATTCGGGTTCCAATTTGGGGAGAAGAAAAAGAGGCTGAACATTGAACAAGTGAAAGCACTTGAGAAGAGTTTTGAGTTAGGGAACAAGCTTGAACCTGAAAGAAAGGTTCAACTTGCTAAGGCCCTTAACTTGCAACCGAGACAAATTGCTATTTGGTTTCAGAATCGGAGGGCAAGGTGGAAGACTAAGCAACTTGAAAGGGAATATGAATCTCTTAAGAAGCAGTTTGAAGCATTGAAGGTTGATAATGATGCACTTAAGGTTCAGAATCAGAAATTACATGCTGAGTTACAGGCCCTAATCAAAGGAAAGGAGTATTATTGTGAAGAAGATGGAGCAATAATAAGCAACCTTAATAAGAAAGAAGCTGGAGAGGGTTCATGGAGTAATAATAATAATAATAATAATGGTTGCAGTGACAATAATAATATTTCATCTTCAGACATTAACTTAGATCTCTCAACAACACCAATTATAAACACTAGTCCAGTATCTTCTCAAAATGCCAAAACTACCCTTGAATCCAATAATGATAATTCTCTAAAGCCCAACAACAACATAATTCAGCTCCTCCAATACTCACCATCATCATCATCAAGACCACAAGGGATTCCTCATCAAGATGAAGGCTTATGCAACATGTTTCATCACCAAATTGAGGATCAACAGAATCTGTGGCCCTGGCCTGAACACCAGCCTCATAATAATTTCCACTGA 1038 0.4104 MAFPPPPSSQSANNFIFHNHEHQPDHHHHHHHQPFSSNSLNSFPSLPIPSHHHFLGQPHNTPSLFLKMGSHQFLGGGGPLMLKRSMSFSGIENKCGGDGDDDLSDDGFGFQFGEKKKRLNIEQVKALEKSFELGNKLEPERKVQLAKALNLQPRQIAIWFQNRRARWKTKQLEREYESLKKQFEALKVDNDALKVQNQKLHAELQALIKGKEYYCEEDGAIISNLNKKEAGEGSWSNNNNNNNGCSDNNNISSSDINLDLSTTPIINTSPVSSQNAKTTLESNNDNSLKPNNNIIQLLQYSPSSSSRPQGIPHQDEGLCNMFHHQIEDQQNLWPWPEHQPHNNFH 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02802 345 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 12 344 IPR045224 GO:0003700
Adu04g02802 345 Pfam Homeobox associated leucine zipper 170 207 IPR003106 GO:0006355|GO:0043565
Adu04g02802 345 SUPERFAMILY Homeodomain-like 102 172 IPR009057 -
Adu04g02802 345 CDD homeodomain 115 171 IPR001356 GO:0003677
Adu04g02802 345 ProSitePatterns 'Homeobox' domain signature. 145 168 IPR017970 GO:0000981|GO:0006355
Adu04g02802 345 MobiDBLite consensus disorder prediction 21 43 - -
Adu04g02802 345 Pfam Homeodomain 115 168 IPR001356 GO:0003677
Adu04g02802 345 ProSiteProfiles 'Homeobox' domain profile. 110 170 IPR001356 GO:0003677
Adu04g02802 345 Coils Coil 162 203 - -
Adu04g02802 345 Gene3D - 111 179 - -
Adu04g02802 345 MobiDBLite consensus disorder prediction 267 290 - -
Adu04g02802 345 SMART HOX_1 113 174 IPR001356 GO:0003677
Adu04g02802 345 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT7 12 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02802 Adu-Chr4 115895959 115898831 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02802 71 337 Homeobox Transcription Factor Family AT5G15150 47.423 1.41e-67 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Adu04g02802 Homeodomain 7.9e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02802 K09338 - gmx:100816097 280.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g02802 04 115895959 115898831 Adu04g02802 04 115895959 115898831 ECH
Adu10g02307 10 97984647 97987038 Adu04g02802 04 115895959 115898831 PCT