Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02758 ATGGCAATGGCAATGGAGAATGATGAAGTGAGATTGAGAAAAAGAAGAAGAAGAGTGTTTGAAGAAGAAGGTGAGCTCCAAGAAGCAAGGTATATCAAGAAGAAGAAGAAGCAGCCGCAGCCGCAACAGCACGAAAATTCTAATGTGATCACTACTAAGAGAAGTTCAAAATTTCGTGGGGTTAGCAGACATAGATGGACGGGTAGGTTTGAGGCTCATTTATGGGACAAGCTTTCTTGGAATGTAACTCAAAAAAAGAAAGGGAAGCAAGTTTATCTTGGTGCTTATGATGAAGAAGAATCTGCTGCCAGAGCATATGATTTAGCAGCACTTAAGTATTGGGGAACATCAACTTTTACTAATTTTCCGTTATCAGATTATGAGAAAGAGCTAGAAATAATGCAGACTATGACCAAAGAAGAGTACTTGGCAACTTTAAGGAGGAAGAGTAGTGGCTTCTCAAGAGGTGTATCAAAGTATAGGGGTGTTGCAAGGCATCATCAGAATGGAAGATGGGAAGCAAGGATAGGAAGGGTTTTTGGAAACAAATATCTTTACCTTGGAACCTACAGCACACAAGAGGAAGCAGCACGAGCCTATGACATAGCAGCAATTGAGTACAGAGGAATTAATGCTGTCACCAACTTTGATTTAAGTAATTACATCACATGGTTGAAGCCTTCACACCAAAACTCCCAAGACCCAAAACCTGAAACAGAAGTAGTACTAAACTCTCAAACACTCACTTCTCCATCCAACTATGCTCCAAATCCAATACAACATTCAAAACCATTGCCCTTTGACAATACCTCTTTCATCAGTCTTGATCACCTGAATTACCCTGAAAATCAAGAAGTCTTTGATAACAAAATGTATCGATTTTCGAGCAGCAAATCGTCTTCTCCCACGGCTCTTGGCCTTCTCTTTCGCTCTTCTCTGTTTAGGGAATTGGTTGAAAAGAACTCAAACAATGCATGTGGAGATGAACCTGATGAGTATGTCAGAAAGGATCAACAACAACACATAGTCAGTGATGATGAACTGGGTGGGTTCTTCTGTGACGGCAGTGACAGCATTTCATTTTTCTATGATCCAAACACAAACGGCTTAGAACTTCAAGAAAGCGACCTCTACTCAATTCTTTGA 1146 0.404 MAMAMENDEVRLRKRRRRVFEEEGELQEARYIKKKKKQPQPQQHENSNVITTKRSSKFRGVSRHRWTGRFEAHLWDKLSWNVTQKKKGKQVYLGAYDEEESAARAYDLAALKYWGTSTFTNFPLSDYEKELEIMQTMTKEEYLATLRRKSSGFSRGVSKYRGVARHHQNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGINAVTNFDLSNYITWLKPSHQNSQDPKPETEVVLNSQTLTSPSNYAPNPIQHSKPLPFDNTSFISLDHLNYPENQEVFDNKMYRFSSSKSSSPTALGLLFRSSLFRELVEKNSNNACGDEPDEYVRKDQQQHIVSDDELGGFFCDGSDSISFFYDPNTNGLELQESDLYSIL 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02758 381 CDD AP2 56 125 IPR001471 GO:0003700|GO:0006355
Adu04g02758 381 SUPERFAMILY DNA-binding domain 56 125 IPR016177 GO:0003677
Adu04g02758 381 Gene3D AP2/ERF domain 158 219 IPR036955 GO:0003700|GO:0006355
Adu04g02758 381 Gene3D AP2/ERF domain 56 125 IPR036955 GO:0003700|GO:0006355
Adu04g02758 381 SUPERFAMILY DNA-binding domain 158 219 IPR016177 GO:0003677
Adu04g02758 381 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 10 370 - -
Adu04g02758 381 CDD AP2 158 219 IPR001471 GO:0003700|GO:0006355
Adu04g02758 381 PRINTS Ethylene responsive element binding protein signature 58 69 IPR001471 GO:0003700|GO:0006355
Adu04g02758 381 PRINTS Ethylene responsive element binding protein signature 199 219 IPR001471 GO:0003700|GO:0006355
Adu04g02758 381 MobiDBLite consensus disorder prediction 30 50 - -
Adu04g02758 381 ProSiteProfiles AP2/ERF domain profile. 159 217 IPR001471 GO:0003700|GO:0006355
Adu04g02758 381 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 10 370 - -
Adu04g02758 381 SMART rav1_2 57 129 IPR001471 GO:0003700|GO:0006355
Adu04g02758 381 SMART rav1_2 159 223 IPR001471 GO:0003700|GO:0006355
Adu04g02758 381 Pfam AP2 domain 56 115 IPR001471 GO:0003700|GO:0006355
Adu04g02758 381 Pfam AP2 domain 158 209 IPR001471 GO:0003700|GO:0006355
Adu04g02758 381 ProSiteProfiles AP2/ERF domain profile. 57 123 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02758 Adu-Chr4 115390170 115392773 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02758 27 221 AP2-EREBP Transcription Factor Family AT5G57390 64.103 2.23e-86 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Adu04g02758 AP2 5.9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02758 - - gmx:100792612 492.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g02758 04 115390170 115392773 Adu04g02758 04 115390170 115392773 ECH