Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02745 ATGGCTTCGCCGTCTCCATCAATGGAAAGAAGGGTTGCCGTTGATGAAGATACCACTGGGGGCGAAGCAGAGCATGGAGTTGGATTGGTTGAGGGCGAAGGCTTTGCGGGGTTGGAATCGTACGAGTACGATTTACACGAAGATGAAACAGGAAACGACCATCCGGTTGAGTGCGAACGCTCTGAAGGGATGGAGTCGGAGGAGAACGACTTTCAGGAAGACGATACAGAAGACGACCGTCATGCAGAGGCCGATGTCGACAATGGGGATGCGGTCGAATTGGAAGACGGTTTGGATGGCGCCGGAGGAATGTCTGAGAATTATGCGGAAGACGAGTTTTACGCCGTTGATTCCGGCGAGTCCATAGGTTGGATTGATTTTTTGAACTTGAGCGCGGAGGATGTTCTCCGGTTTAATTTCGCAGATGTTGACATTGCATTTGAGTTCTATCAGCAATATGCAAAGCACCATGGATTCGGCGCGAGACGTTCCAGAAGCGAAAAACGCGGCGAAGTAAGGATACGGCAGGAGTTCGTGTGCCACCGACAAGGGTTCCGATCCCCGAAGTTCTACTCGATGCCTAACCGGCAAAAGAGGCCGAGGGCCGAGACACGGTGTGGATGCCCTGCGAGGATGTTACTCCGCATGGACGATGAATCAGGACGTTGGCACGTTGCGTTCTTTTCAGACGCGCATAACCACCACGTTCTTGAGTTGCGATTTTCTTCCATGCTCCCGGGCCATCGGAGGATGAGCGAAGCGGACATCCAGCAGATGAACGACATGCGCAAAGGGGGCATTGGCGTCTCCCGAATCCACGGTTTTATGGCGAGCCTGGCCGGCGGGTATCATAATGTCCCGTACACAACAAGGGACATGCACAATGTAAATGCGAAGCAACGAAGGGAGGGTGGCGTAGATGCGGAATCGTGCTTGAGGTATCTCCGAGAGTGCAAGGCAAATGATCCCGCACTGTACTACAAGGAAGTCGTTGACGGTGAGGGCGTGCTGCAACacttgttttgGGCCTGTGCAATGAGGGTGGTTGACTCTGAAGACAACGGTTCCTATTTTATTCACACCGTCTCTCGATACGGCACTCCGGGGAAGGAGTGGCGTGTTGTTGCAACGTCTGATACGAGGGAGGTCCGATGCACGTGCATGAGAATGGAATGTTTCGGGGTCCCCTGCGAACATATAATTGCGGTGCTTGTTCTTAACAATGTTCATGAGATCCCGAGGTCTCTGATATTACCGAGATGGACCAAGGATGCAAAACTTGTGGCGGTGGAGTCGATGGGCGTGATTTGGGATTCTGTACAGCTGACGCAACACTGGTGCCTGATGGATTGGTACCGGAAAGTGTGCAAGATTGCATGTCACAGCACCGAGAAGTTCCAGTTTGCAAGAGACATAGCTGTGCTGATGCTGAAGCACTTCGAGAACGAAGATGCAGGGAACAGCAGTTTTCAACACGAGGGGCCACCTACTGAGGGCGGGAGACCCCCGGCGCGAAATCCACCCAGGCGCAGTACAAAGGGTATCGGTGGTCACGGTGGAAAGAAGACCCAGCGATGTCGTTTGTGCCGGGAGGTGGGACACAACAGGACGACGTGTCCGGAGCGTCGCACAATGGAACCATCCAGCTCAGTTGCAGAAGACATGGATTCGATGGACACTGACATGGTCTATGATAACCTATCCGGCGATCTGTATGCGACCGCGGAGATTCCTTCGTTCGAATGCTCCGATAGTGACGCGCAGGCCGGTTTTGCTAACAGCGACTTTGCTGGGGCCAAGACGTCCGGGCCAGTCATGTCACTCGCGGATTGA 1833 0.5346 MASPSPSMERRVAVDEDTTGGEAEHGVGLVEGEGFAGLESYEYDLHEDETGNDHPVECERSEGMESEENDFQEDDTEDDRHAEADVDNGDAVELEDGLDGAGGMSENYAEDEFYAVDSGESIGWIDFLNLSAEDVLRFNFADVDIAFEFYQQYAKHHGFGARRSRSEKRGEVRIRQEFVCHRQGFRSPKFYSMPNRQKRPRAETRCGCPARMLLRMDDESGRWHVAFFSDAHNHHVLELRFSSMLPGHRRMSEADIQQMNDMRKGGIGVSRIHGFMASLAGGYHNVPYTTRDMHNVNAKQRREGGVDAESCLRYLRECKANDPALYYKEVVDGEGVLQHLFWACAMRVVDSEDNGSYFIHTVSRYGTPGKEWRVVATSDTREVRCTCMRMECFGVPCEHIIAVLVLNNVHEIPRSLILPRWTKDAKLVAVESMGVIWDSVQLTQHWCLMDWYRKVCKIACHSTEKFQFARDIAVLMLKHFENEDAGNSSFQHEGPPTEGGRPPARNPPRRSTKGIGGHGGKKTQRCRLCREVGHNRTTCPERRTMEPSSSVAEDMDSMDTDMVYDNLSGDLYATAEIPSFECSDSDAQAGFANSDFAGAKTSGPVMSLAD 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02745 610 Pfam SWIM zinc finger 382 404 IPR007527 GO:0008270
Adu04g02745 610 PANTHER OS03G0181600 PROTEIN 370 492 - -
Adu04g02745 610 MobiDBLite consensus disorder prediction 63 81 - -
Adu04g02745 610 MobiDBLite consensus disorder prediction 1 105 - -
Adu04g02745 610 MobiDBLite consensus disorder prediction 40 62 - -
Adu04g02745 610 ProSiteProfiles Zinc finger SWIM-type profile. 372 408 IPR007527 GO:0008270
Adu04g02745 610 MobiDBLite consensus disorder prediction 485 524 - -
Adu04g02745 610 PANTHER OS03G0181600 PROTEIN 137 352 - -
Adu04g02745 610 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 137 352 IPR031052 GO:0006355
Adu04g02745 610 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 370 492 IPR031052 GO:0006355
Adu04g02745 610 SUPERFAMILY Retrovirus zinc finger-like domains 511 546 IPR036875 GO:0003676|GO:0008270
Adu04g02745 610 Pfam FAR1 DNA-binding domain 148 237 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02745 Adu-Chr4 115253418 115256036 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu04g02745 FAR1 3.4e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02745 - - ahf:112701185 654.825