Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02744 ATGCCGCCGCTCGCTGATTTTCGCTTCTTCAGATTCATAATCCCCAACATGGAGAATCAAATTAGATTGCCGGTGGCCTTCTCCAACGTTGTACGGGATAACATGAGCAACCCTGTCGAGGTAATCACAACAAACGGTCAGTCGTGGAGCATCTCGTGGTTTGTGGAGGAGGAGCATCCGCATCAAGTCGTTTTCACCCGAGGCTGGCGAGCCTTTTACGAACACTACCACCTGCGAATCGGTGACTCAATGCTGCTATCGTATCACCAACCCAAGTTTTTCTATGCGGCCATCCACGACACAACATACTTCGAGATCAACTACGGAAGAAACTTGAGAAACGGAAGTCTTCCGGCAATACCCGCACATGGCAACTATGCAGTCCAGTTCTTCGAGATAATCCCGGTGAACGACCATGCTAAACTAAAGCTCCCGCTTCGGTTCTCTCGGGAATATGGCCGGTCCCTACCGCGACCACTGACCCTAACCACGCCTACAGGACATCGTCATCGCGTGGGGTGGAATATGCAACCTAATGGGAGGATCGTGCTTCATGGAGGATGGGACGGTGTCCGAGCACGCTATGGCCTAAGGGATCAGTGGCTTGTGCTGTTCCGTTACCACGCCCTTCAGAACACAATGTACGTCATGTTCTTCAACGGTCAGACAATGGAAATCAACTACTTGGCCCATGCCGGCCCCGGGACGGACTCCACTTGTATGACCTATCCGTCGGCCCCCAGGTCAAGGCACATAGCCGATGGGTTCAGATCGACCAATCCGTTCTTTGTAATTCCAATCGTGCACCGCCTGGCAAACCGTTTTCTCGGGCGCGTGGACCATTCGGTTTACGCACTACGTCGGGAGGACGAACGGATGCTTTGGAATTGGCTGGACTGCCTTAGCAAATGCATGCCAACTAAGACACGGCCATGTTTGTGTCTTCGAACGGCTTGCGCCGCAAGAATACCGGCTGCATGTATATTGAGAACTCCGGTCCCCTAA 1005 0.5284 MPPLADFRFFRFIIPNMENQIRLPVAFSNVVRDNMSNPVEVITTNGQSWSISWFVEEEHPHQVVFTRGWRAFYEHYHLRIGDSMLLSYHQPKFFYAAIHDTTYFEINYGRNLRNGSLPAIPAHGNYAVQFFEIIPVNDHAKLKLPLRFSREYGRSLPRPLTLTTPTGHRHRVGWNMQPNGRIVLHGGWDGVRARYGLRDQWLVLFRYHALQNTMYVMFFNGQTMEINYLAHAGPGTDSTCMTYPSAPRSRHIADGFRSTNPFFVIPIVHRLANRFLGRVDHSVYALRREDERMLWNWLDCLSKCMPTKTRPCLCLRTACAARIPAACILRTPVP 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02744 334 PANTHER B3 DOMAIN-CONTAINING 123 231 - -
Adu04g02744 334 PANTHER B3 DOMAIN-CONTAINING 8 109 - -
Adu04g02744 334 Gene3D - 5 103 IPR015300 -
Adu04g02744 334 Gene3D - 125 223 IPR015300 -
Adu04g02744 334 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 123 231 - -
Adu04g02744 334 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 8 109 - -
Adu04g02744 334 SMART B3_2 9 102 IPR003340 GO:0003677
Adu04g02744 334 SMART B3_2 130 222 IPR003340 GO:0003677
Adu04g02744 334 ProSiteProfiles B3 DNA-binding domain profile. 6 102 IPR003340 GO:0003677
Adu04g02744 334 SUPERFAMILY DNA-binding pseudobarrel domain 9 108 IPR015300 -
Adu04g02744 334 CDD B3_DNA 136 220 IPR003340 GO:0003677
Adu04g02744 334 Pfam B3 DNA binding domain 18 90 IPR003340 GO:0003677
Adu04g02744 334 CDD B3_DNA 7 88 IPR003340 GO:0003677
Adu04g02744 334 SUPERFAMILY DNA-binding pseudobarrel domain 133 219 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02744 Adu-Chr4 115250984 115252415 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02744 139 224 REM Transcription Factor Family AT4G33280 30.233 6.51e-09 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Adu04g02744 B3 1.1e-07 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02744 - - ahf:112746889 544.273