Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02729 ATGGATAACAGTAGTGATGTTCCAGCACGTGTTCAGATGTCAGGTTTTAAAAAAAATAAAAAACATTTGTCAATTAAAGTACAAAAGACTGGTAATAAGAAGGTGATTAGTGCACACAAAACTAAGTTTTCACACCCTAAGCCTACAAAATCACGAGCTCCAGTTCCTTCACATGTATCTAAAAAGCCTTCAGCATTACCACCCTCTTCTTCCCAGCCACCACAAAAATTCAAGAGAAATTTACTATCTTCCCATGTCGATCATACACCATCACCATCACCATCACCAGCTGAATCACTATACTGTTCACCTATCCAATCTCAGTCATTTGATAATGCTCCTAATAATGAACGAAATTTACATCATGCTCACTCATCGGATGAAAATCATCATGATGAATCTCTTACCCAAGAAGGTTTAATCCATGTACTGTTGTTCGTAACAAATGTCATTAAGAGCAAATTTTCAGAATTCTGCCCTTCTTGGAGACATGCTAGTGAGCAAATGCGAGATTTGTGGTTTACTGAATTTAAAGAGAAAGCTACGGGAGTAAAACCTTCTCTAGAGGAGGTTTATACTAAATGCCACACCAAAAAAGACAAAAGTTGGATTGATGAAAGATCTGAGAAAGTCATTGGTGAATTCAAAAAGCGAAAGACAGAACTTTCTCAAGTAGCTTTATCCTTGGATATTGATGAAGATGTTGAGGCATTTAAGGAAAGCCTAGATATACCAGATGATTATACTGTTTGGAATGAAGTTGTGACAAGGGGAAAAAAGAAAGTTGCTTTTGGCTTAGGTTCTTTTGGTTTAGATCTCTCTTCAAAGTTGGATTCCAGAAATTGTTCAGAGACATCTAAAGACAATCTAAATATTGAGCAAGAACTTCACATGTGGAAAGAAAAAGCAAAGGAGCAAGAAATGATCAATGAAGAGCAAAAGATTAAGTTGAAAGATGCTGAGCACAACTCCATTGAAGATGTGACGTCCTCCGCTGTTGCCGTCATTGTCGCCGCCGTGGCTCACGTCGCACGAGCTCCTTCCACCGCCGCTCTGAATGCGTTTGCTCCTTTCGTCGTCACACGAGCTCTCTCAGCCGTGCTCTTGTCTTACGAGCTCCCTCCGCCGCTGCCCTCGCGCTGCTTCTTCTCTCCTCGCTGGAGGTCCGCTGAAGGTTACACCATCTATGGTCGAGTGAAAATCCCCAGCAATTTAGGAACAAAAGACTATATAATTCCTGGAAAAGTGTCGAATGTCAAAGTCATACTCAATGTTATTGGAAGAAGCATGAGTTATGGAAAGGACGACATAGAAGCTCCTCGGAGCTCCGGTGACATCGACGATGGAGGCTCCTCCTCCAATCCCTTTGATACTGTCAGAACAAAAGATGCTTCCGTTCAACAACTCAAGCTTGTACCAACTGCTATTGGTACAGCAATGGATGTTAACCTGAGCAATGCATCTCTAGTTTTTATCTCTGTCACATTTGCTACAATGTGTAAATCTGCTGCTCCAATTTTTCTACTTCTGTTTGCATTTGCTTTCAGGTTGGAGACACCAAGCTTTAAACTATCAGGCATCATCATGGTCATCTCCATTGGGATACTATTAACAGATTTTCAAGTAGTGAAACTGTTACTGCAGATCCAGTATCTCCTTTCTTGGGTTATGGAGGCTGCTGCTATAATGGCAATTGCTCTTGCCAATGGAGGGGGTAAGCCTCCTGATTGGCAAGACTTTGTTGGTATTATCACTTTTCTTGTCATCAATTCAACCATCAGTTTCATAGAGGAGAACAATGCTGGTAATGCTGCTGCATCTCTCATGGCTCGTCTCGCTCCGAAAGCAAAGGTGAAGTTGTCTGGATCAATTAGCAGTCAATACTTGACTGCATTGCTCATGGCAGCTCCTTTGGCCCTTGGTGATGTTGAAATTGAGATTATCGATAAACTGATTTCTGTTCCCTACGTTGATATGACTTTGAAACTGATGGAGCGCTTTAGAGTCCATGTGGAGCACAGTGGTAACTGGGATAGGTTCTTGGTCCACGGAGGCGATGCTTCTAGTGCCAGCTACTTCCTCGCAGGTGCAGCTGTTACCGGTGGGACTATCACAGTTGTAGGCTGCGACACAAGTAGTTTACATGAGATGTCAAGATTAACTTTCAATGTGGAGCTTGATGCTGCTAATGCAACTTAG 2199 0.4206 MDNSSDVPARVQMSGFKKNKKHLSIKVQKTGNKKVISAHKTKFSHPKPTKSRAPVPSHVSKKPSALPPSSSQPPQKFKRNLLSSHVDHTPSPSPSPAESLYCSPIQSQSFDNAPNNERNLHHAHSSDENHHDESLTQEGLIHVLLFVTNVIKSKFSEFCPSWRHASEQMRDLWFTEFKEKATGVKPSLEEVYTKCHTKKDKSWIDERSEKVIGEFKKRKTELSQVALSLDIDEDVEAFKESLDIPDDYTVWNEVVTRGKKKVAFGLGSFGLDLSSKLDSRNCSETSKDNLNIEQELHMWKEKAKEQEMINEEQKIKLKDAEHNSIEDVTSSAVAVIVAAVAHVARAPSTAALNAFAPFVVTRALSAVLLSYELPPPLPSRCFFSPRWRSAEGYTIYGRVKIPSNLGTKDYIIPGKVSNVKVILNVIGRSMSYGKDDIEAPRSSGDIDDGGSSSNPFDTVRTKDASVQQLKLVPTAIGTAMDVNLSNASLVFISVTFATMCKSAAPIFLLLFAFAFRLETPSFKLSGIIMVISIGILLTDFQVVKLLLQIQYLLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITFLVINSTISFIEENNAGNAAASLMARLAPKAKVKLSGSISSQYLTALLMAAPLALGDVEIEIIDKLISVPYVDMTLKLMERFRVHVEHSGNWDRFLVHGGDASSASYFLAGAAVTGGTITVVGCDTSSLHEMSRLTFNVELDAANAT 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02729 732 PANTHER AROM/DEHYDROQUINATE SYNTHASE 614 719 - -
Adu04g02729 732 Gene3D - 549 641 - -
Adu04g02729 732 Coils Coil 303 323 - -
Adu04g02729 732 Pfam EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 607 715 IPR001986 GO:0016765
Adu04g02729 732 MobiDBLite consensus disorder prediction 63 116 - -
Adu04g02729 732 Gene3D Enolpyruvate transferase domain 668 725 IPR036968 GO:0016765
Adu04g02729 732 MobiDBLite consensus disorder prediction 1 134 - -
Adu04g02729 732 MobiDBLite consensus disorder prediction 117 134 - -
Adu04g02729 732 PANTHER 3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE, CHLOROPLASTIC 614 719 - -
Adu04g02729 732 SUPERFAMILY Calcium ATPase, transmembrane domain M 543 614 IPR023298 -
Adu04g02729 732 Pfam Plant transposase (Ptta/En/Spm family) 178 269 IPR004252 -
Adu04g02729 732 MobiDBLite consensus disorder prediction 15 47 - -
Adu04g02729 732 SUPERFAMILY EPT/RTPC-like 615 715 IPR013792 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02729 Adu-Chr4 114997078 115006411 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02729 553 643 Primary Pumps ATPases AT2G07560 69.149 8.93e-21 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02729 K00800 - adu:107494561 273.092