Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02698 ATGTGGCCACCACCACGACTTTTCTCTCCTACCTCTCTGCCTCCTCAAACTCTCCTGCCGATGAAACCTTCCTCTAAACCAACTCAGATACCACGTTTTCTTCCCCCAACTTCAACTCCAGCACCATTTTTTTGGTCAAGTGGCCTCATCGTTGAAATAGTAGCAGCAGTCACTTTTGTCATTTTGATTGTGGTGTTTTGCGCTTTTGGCTTTTTTCATTGGAAGAATAGGAAGAGAGAACATGATAAAGGTCTCGGACTTAAAGGCAATAGCGGCATAATGGAAATGTCATCAAAGAACAGAATATTCAGATACGAGGAGTTGGCAGTTGCAACAGATGGGTTCTCGAAAGCAAATTTACTTGGAGAAGGTGGATTCGGTTATGTCCACAAAGGACTCCTTCCAAACGGCAAAGAGGCTGCCATCAAACAGCTCAAGGATGGAAGTAGGCAGGGAGAGCGTGAATTCCAAGCTGAAGTAGACATAATCACTCGGCTTCATCACAGGAATCTCGTTTCTTTGCTTGGATATTGCATCGCCGACCACCATAGACTTCTCGTCTATGAATTTGTTCCAAACAATACATTAGAGTTCCATCTACATGGGCAAGGTCCTACTTTAGATTGGCCTACAAGAATGAGGATTGCCCTAGGAGCTGCTAAGGGATTAGCATATCTTCATGAGGAATGTTATCCCAAGATCATCCATCGTGATATCAAAGCTGCTAACATTCTCCTCGATTTTAATTTCCAAGCGAAGGTTGCTGATTTTGGGCTTGCAAAGTTTTGCCCGGATATGAATACGCATGTTTCCACTCGAGTGATGGGAACTCTAGGGTATGTAGCTCCTGAATATGCTTCCAGTGGAAACCTCACCGAAAAGGCCGACGTTTTCTCCTTTGGAGTCATGCTTCTCGAGTTAATTACTGGCCGCCGACCAGTAATTGATTCACATCATACTTTCATGGAGGCAATGCCTTTGCTAACAAAGGTTTTGAAAGAGAATAATTTTGAAGTTGTAGCTGACCGAAAGCTCCAAAATCAGTATGAACCAACCGAAATGGTTTCCATGCTGGCTTCTGCAGCTGCTTCTATACGATATGAAGCAAAGCTTCGACCAAAGATGAGTCAGATAGTTCGTGCTTTGGAAGGAGATGCATCTCAAGTAGCTGAGTTCACTTCTAATGTATTATGTTTAGATTCTGACGAGAAATGA 1215 0.4337 MWPPPRLFSPTSLPPQTLLPMKPSSKPTQIPRFLPPTSTPAPFFWSSGLIVEIVAAVTFVILIVVFCAFGFFHWKNRKREHDKGLGLKGNSGIMEMSSKNRIFRYEELAVATDGFSKANLLGEGGFGYVHKGLLPNGKEAAIKQLKDGSRQGEREFQAEVDIITRLHHRNLVSLLGYCIADHHRLLVYEFVPNNTLEFHLHGQGPTLDWPTRMRIALGAAKGLAYLHEECYPKIIHRDIKAANILLDFNFQAKVADFGLAKFCPDMNTHVSTRVMGTLGYVAPEYASSGNLTEKADVFSFGVMLLELITGRRPVIDSHHTFMEAMPLLTKVLKENNFEVVADRKLQNQYEPTEMVSMLASAAASIRYEAKLRPKMSQIVRALEGDASQVAEFTSNVLCLDSDEK 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02698 404 SMART serkin_6 115 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02698 404 Pfam Protein tyrosine and serine/threonine kinase 118 382 IPR001245 GO:0004672|GO:0006468
Adu04g02698 404 MobiDBLite consensus disorder prediction 1 30 - -
Adu04g02698 404 ProSiteProfiles Protein kinase domain profile. 115 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02698 404 SUPERFAMILY Protein kinase-like (PK-like) 90 382 IPR011009 -
Adu04g02698 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Adu04g02698 404 CDD STKc_IRAK 121 384 - -
Adu04g02698 404 Gene3D Transferase(Phosphotransferase) domain 1 191 397 - -
Adu04g02698 404 MobiDBLite consensus disorder prediction 1 21 - -
Adu04g02698 404 Gene3D Phosphorylase Kinase; domain 1 79 190 - -
Adu04g02698 404 ProSitePatterns Protein kinases ATP-binding region signature. 121 143 IPR017441 GO:0005524
Adu04g02698 404 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 94 387 - -
Adu04g02698 404 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 94 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02698 Adu-Chr4 114541512 114550097 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02698 88 404 Trihelix Transcription Factor Family AT4G32710 59.633 2.08e-123 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Adu04g02698 PK_Tyr_Ser-Thr 4.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02698 - - ahf:112743291 724.931