Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02694 ATGGAATCCAAATTGGGACCACGAAATCCTATTCTCTGTGCTCAATACCGTCAATTATTTCACCAAGGTACCAACCTCTGTCTAGCTGTAGGATGTGACTGTCCTCCTCCTTCTCCACTTTCTCACTTTTCATTGTCACCACCACCGTTACCTCCTCCGCCATTGTTGCCGCCACCGCCACCGCCACCCCCACTAGTTATTTCCCCACCAAAGCCGCCACTGCCACCGCCACCGCCACCACCACCACCACTAGCTCTTTCCTCACCAATGCCACCACCGCCACGACTTTTCTCTCCTGCCCCTCCACCTCCTCAAACTCCCCTGCCGATGAAACCTTCCTCTAAACCAACCCAGGTACTGCATTTCCCTCCTCCAAGTTCGACTCCAGCACCATCTTTTTCGTCAAGTGGCGTCATCGTTGGAATGGCGGCAATCGTTACTTTCGCCATTTTGATTGTGGTGCTTAGCGCTTTTGGTATTTCTTATTGGAAGAATTGGAAGAGAAAACATGATAAAGATCTTGGATTTAAAGGCAATAACGGAATAATAGAAATGTCATCAAAGAACAGAATATTCAGATACGAGGAGTTGGAAGTTGCAACAGATGGGTTCTCGAAAGCAAATTTGGTTGGAGAAGGTGGATTCGGTTATGTCCACAAAGGAGTTCTTCCAAACGGCATGGAGGCTGCCATCAAACAGCTCAAGGATGGAAGTAGGCAGGGAGAGCGTGAATTCCAAGCTGAAGTAGACATAATCACTCGGCTTCATCACAGGAATCTCGTTTCTTTACTTGGATATTGCATCGCTGGCCACCATAGACTTCTCGTCTACGAATTTGTTCCAAACAATACATTAGAGTTCCATCTACATGGGCAAGGTCCTACTGTAGATTGGCCTACAAGAATGAGGATTGCTCTAGGAGCTGCTAAGGGATTAGCATATCTTCATGAGGAATGTTATCCCAAGATCATCCATCGTGATATCAAAGCCGCTAACATTCTCCTCGATTTTAATTTCCAAGCGAAGGTTGCTGATTTTGGGCTTGCAAAGTTCTGCCCGGATATGAATACGCATGTTTCCACTCGAGTGATGGGAACTCTAGGGTATGTAGCTCCTGAATATGCTTCCAGTGGAAATCTCACTGAAAAAGCCGACGTTTTCTCCTTCGGAGTCATGCTTCTTGAGTTAATTACTGGCCGCCGACCAATAATTGATTCACATCATACTTTCGTAGAGGCAATGCCTTTGCTAACAAAGGTTTTGAAAGAGAATAATTTTAAAGTTGTAGCTGACCGAAAGCTCCAAAATCAGTATGAAGCAACCGAAATGGTTTCCATGCTGGCCTCTGCAGCTGCTTCTATACGATATGAAGCAAAGCTTCGACCAAAGATGAGCCAGATAGTTCGTGCTTTGGAAGGAGATGCATCTCAAGTAGCTGAGTTCACTTCTAATGTATTATGCTTAGATTCTGAGGCTGTTACGCACAGACAAGAAATGATTAAAATCATTAGTGACATGAGTGGATCCACGAGTTAA 1536 0.4531 MESKLGPRNPILCAQYRQLFHQGTNLCLAVGCDCPPPSPLSHFSLSPPPLPPPPLLPPPPPPPPLVISPPKPPLPPPPPPPPPLALSSPMPPPPRLFSPAPPPPQTPLPMKPSSKPTQVLHFPPPSSTPAPSFSSSGVIVGMAAIVTFAILIVVLSAFGISYWKNWKRKHDKDLGFKGNNGIIEMSSKNRIFRYEELEVATDGFSKANLVGEGGFGYVHKGVLPNGMEAAIKQLKDGSRQGEREFQAEVDIITRLHHRNLVSLLGYCIAGHHRLLVYEFVPNNTLEFHLHGQGPTVDWPTRMRIALGAAKGLAYLHEECYPKIIHRDIKAANILLDFNFQAKVADFGLAKFCPDMNTHVSTRVMGTLGYVAPEYASSGNLTEKADVFSFGVMLLELITGRRPIIDSHHTFVEAMPLLTKVLKENNFKVVADRKLQNQYEATEMVSMLASAAASIRYEAKLRPKMSQIVRALEGDASQVAEFTSNVLCLDSEAVTHRQEMIKIISDMSGSTS 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02694 511 ProSiteProfiles Protein kinase domain profile. 204 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02694 511 Gene3D Transferase(Phosphotransferase) domain 1 280 489 - -
Adu04g02694 511 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 185 476 - -
Adu04g02694 511 MobiDBLite consensus disorder prediction 41 111 - -
Adu04g02694 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 323 335 IPR008271 GO:0004672|GO:0006468
Adu04g02694 511 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 185 476 - -
Adu04g02694 511 SMART serkin_6 204 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02694 511 PRINTS Proline rich extensin signature 37 49 - -
Adu04g02694 511 PRINTS Proline rich extensin signature 52 73 - -
Adu04g02694 511 PRINTS Proline rich extensin signature 73 89 - -
Adu04g02694 511 PRINTS Proline rich extensin signature 91 108 - -
Adu04g02694 511 CDD STKc_IRAK 210 473 - -
Adu04g02694 511 Pfam Protein tyrosine and serine/threonine kinase 208 471 IPR001245 GO:0004672|GO:0006468
Adu04g02694 511 Gene3D Phosphorylase Kinase; domain 1 168 279 - -
Adu04g02694 511 ProSitePatterns Protein kinases ATP-binding region signature. 210 232 IPR017441 GO:0005524
Adu04g02694 511 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Adu04g02694 511 MobiDBLite consensus disorder prediction 41 128 - -
Adu04g02694 511 SUPERFAMILY Protein kinase-like (PK-like) 181 471 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02694 Adu-Chr4 114447122 114451635 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02694 177 491 Trihelix Transcription Factor Family AT4G32710 60.245 2.09e-124 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Adu04g02694 PK_Tyr_Ser-Thr 2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02694 - - ahf:112743291 753.051