LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu04g02692	ATGGAATCCAAATTGGGACCACGAAATCCTATTCTCTGTGCTCAATACCGTCAATTATTTCACCAAGGTACCAACCTCTGTCTAGTAGTAGGATGTGATTGTCCTCCTCCTTCACTTTTTCTTTCATTTCCTCCTCGCCCGCCTCTCCAGTCTTCCTTGTCACCCCCACCGTTACCTCCTCGTCCACCATTATTGCCGCTATCACCTCCGCCACCACCACTGGCTCTTTCCCCACCAATGCTGCCACCGCCACCGTCACCACCACTGGCTCTTTCCCCACCAATACCGCCACTGCCAACGCCACCACTACTAGCTCCACCACTAGCTCTTTCCCCACCAATGCCACCACCGCCACGACTTTTTTCTCCTGCCCCTCCGCCTCCTCAAACTCCCCTGCCGACGAAACCTTCCTCTAAACCAACCCAGGTACTGCATTTTCCTCCTCCAACTTCAACTCCAGTATCATCTTTTTCGTCAAGCGGCCTCATCGTTGGAATGGCGGCAGCAGTCACTTTCGCCATTTTGATTGTGGTACTTAGCGCTTTTGGCATTGTTTATTGGAAGAATAGAAAGAGAGAACATGATAAGGGGCTCAGACTTAAAGGCAATAACGGAATAATAGAAATGTCATCAAAGAACAGAATATTCAGATACGAGGAGTTGGAAGTTGCAACAGATGGGTTCTCGAAAGCAAATTTGGTTGGAGAAGGTGGATTCGGTTATGTCCACAAAGGAGTTCTTCCAAACGGCATGGAGGCTGCCATCAAACAGCTCAAGGATGGAAGTAGGCAGGGAGAGCGTGAATTCCAAGCTGAAGTAGACATAATCACTCGGCTTCATCACAGGAATCTCGTTTCTTTACTTGGATATTGCATCGCCGGCCACCGTAGACTTCTCGTCTACGAATTTGTTCCAAACAATACATTAGAGTTTCATCTACATGGGCAAGGTCCTACTTTAGATTGGCCTACAAGAATGAGGATTGCCCTAGGAGCTGCTAAGGGATTAGCATATCTTCATGAGGAATGTTATCCCAAGATCATTCATCGTGATATCAAAGCTGCTAACATTCTCCCCGATTTTAATTTTCAAGCAAAGCTTGCTGATTTTGGGCTTGCAAAGTTTTGCCCGGATATGAATACGCATGTTTCGACTCGAGTCATGGGAACTCTAGGGTATGTAGCTCCTGAATATGCTTCCAGTGGAAATCTCACTGAAAAAGCCGACGTTTTCTCCTTTGGAGTCATGCTTCTCGAGTTAATTACTGGCCGCCGACCAGTAATTGATTCACATCATACTTTCATGGAGGCAATGCCTTTGCTAACAAAGATTTTGAAAGAGAATAATTTTAAAGTTGTAGCTGACCAAAAGCTACAAAATCAGTATGAAGCAACCGAAATGGTTTCCATGCTGGCCTCTGCAGCTGCTTCTATACGATATGAAGCAAAGCTTCGACCAAAGATGAGCCAGATAGTTCGTGCTTTGGAAGGAGATGCCTCTCAAGTAGCTGAGTTCACTTCTAATGTATTGTGCTTGGATTCTGAGGCTGCTATATACAGACGAGAAATGATCAAAATCATTAATGACATGAGTGGATCCACGAGTTAA	1608	0.4571	MESKLGPRNPILCAQYRQLFHQGTNLCLVVGCDCPPPSLFLSFPPRPPLQSSLSPPPLPPRPPLLPLSPPPPPLALSPPMLPPPPSPPLALSPPIPPLPTPPLLAPPLALSPPMPPPPRLFSPAPPPPQTPLPTKPSSKPTQVLHFPPPTSTPVSSFSSSGLIVGMAAAVTFAILIVVLSAFGIVYWKNRKREHDKGLRLKGNNGIIEMSSKNRIFRYEELEVATDGFSKANLVGEGGFGYVHKGVLPNGMEAAIKQLKDGSRQGEREFQAEVDIITRLHHRNLVSLLGYCIAGHRRLLVYEFVPNNTLEFHLHGQGPTLDWPTRMRIALGAAKGLAYLHEECYPKIIHRDIKAANILPDFNFQAKLADFGLAKFCPDMNTHVSTRVMGTLGYVAPEYASSGNLTEKADVFSFGVMLLELITGRRPVIDSHHTFMEAMPLLTKILKENNFKVVADQKLQNQYEATEMVSMLASAAASIRYEAKLRPKMSQIVRALEGDASQVAEFTSNVLCLDSEAAIYRREMIKIINDMSGSTS	535

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu04g02692	535	PANTHER	PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4	209	500	-	-
	Adu04g02692	535	CDD	STKc_IRAK	234	497	-	-
	Adu04g02692	535	Pfam	Protein kinase domain	229	480	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Adu04g02692	535	PANTHER	PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4	209	500	-	-
	Adu04g02692	535	MobiDBLite	consensus disorder prediction	106	135	-	-
	Adu04g02692	535	Gene3D	Phosphorylase Kinase; domain 1	190	303	-	-
	Adu04g02692	535	SMART	serkin_6	228	495	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Adu04g02692	535	ProSitePatterns	Protein kinases ATP-binding region signature.	234	256	IPR017441	GO:0005524
	Adu04g02692	535	PRINTS	Proline rich extensin signature	35	47	-	-
	Adu04g02692	535	PRINTS	Proline rich extensin signature	51	72	-	-
	Adu04g02692	535	PRINTS	Proline rich extensin signature	72	88	-	-
	Adu04g02692	535	PRINTS	Proline rich extensin signature	89	106	-	-
	Adu04g02692	535	PRINTS	Proline rich extensin signature	107	132	-	-
	Adu04g02692	535	MobiDBLite	consensus disorder prediction	106	151	-	-
	Adu04g02692	535	Gene3D	Transferase(Phosphotransferase) domain 1	304	512	-	-
	Adu04g02692	535	ProSiteProfiles	Protein kinase domain profile.	228	506	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Adu04g02692	535	ProSiteProfiles	Prokaryotic membrane lipoprotein lipid attachment site profile.	1	32	-	-
	Adu04g02692	535	SUPERFAMILY	Protein kinase-like (PK-like)	205	495	IPR011009	-
	Adu04g02692	535	MobiDBLite	consensus disorder prediction	47	94	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu04g02692	Adu-Chr4	114416708	114423260	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu04g02692	197	515	Trihelix Transcription Factor Family	AT4G32710	58.912	9.32e-124	378

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_PERK-1	Adu04g02692		Pkinase	2.9e-44	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu04g02692	-		-	ahf:112743291	760.37