Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02688 ATGCACAAACCAGAGACCCGAATTGGCTGCCAAGCAAAGTTGTCGGTGTACTTGGACAAGAATGAGAATAACTGGAAGGTAAGGAAAGTAGTGACGAAGCACAATCATGAATTGGCACCTGTTGGGATGGTACACTTGATAGCGAGTCACCGTCAATTAAATGAGGCAGCTAAGGCGCAGATAGATGGGATGCATGCACATGGAATCGCAACGTCGAAGATACTGGGATATATGGCTTGTGTGACCGGAGGGTACTCCTTGCTTGGGTTCTTGAAGAAGGATGCGTATAATTATGCTAACAAGGCGAGGCGGGCGAAATTAGTGGACGGTGATGCAAATGCAGCCCTAGTATATCTTGAAGGAAAGGCTGCTTCGGACCCGATGTCAATTGCAAGGTACGGCATGAATGCtgacgaaaggctggggaatttgatatgggctgatgGGATTAATGCATTCGTCAACAAGTTCTCCAAGTCAACCCACAGTATACTTGAGATGATCCAAAACTTGGAACTAGTAGTACGCGAATATAGAAGCAAGGAAATACTCCTCCAATTCAACTCCATACACACTGTGCCTGTGATGACCACTTGTCTTAAATCAATCAAGTCTGCTGCCGCAAAGGTGTATACGAGGGAGGTGTTTTCAGATGTGAAGAAGGAAATAGAAAAGGCTGGAGCTGTTAATCTAGTGAGGAAAAGAAGGTGCCTCAACACCATGGTGTACACTTTAGAGGAGTATGGGAAACCGAACATGCACATAATGGCATGTTTTGGTAGGGCGGGAAAACTAGAATGCCAATGTAACATTTGGCGAAGAAATGGTTATCCTTGTAGGCATATATTCTTCGTGATGAAAGTTGAGCACCTTGCAGAGATTCCAGAACCCTTAGTTCTGAAGCGATGGAGATTGGATGCAAAATTTCCGGACAAATATGTTGAGAATTGGGAGGATTCAAGCGAGAGGGGTTACTTACTACGCCATGGTGCACTATATTCTGCATCACAGTGGCTATTTTTCCTTGGGGCACATAACTTAGCGATGTTTCGTAAGGCAATGGATGGAATAGTTAGCCTGTGTGAAATCCTAGAGGCAGATTGCAAGTTTCGGACTGCAAGAGATGGCATAAAGGATGCAAAAGGTGTTGTGAAGGACCCAGAGGTTGCAAAATCAAAAGGAGTTTCAAAGATGGCAAAGACTGTGCATAGTAAGCGTAGGCGTTGCACCTCTTGCAAACGCACTGGGCACACAAAGAGGAATTGTCCCAAAAGAAGGACCAGAAAGAACCCTCGAGCAGAGAACGATTGTGTCGATCCATCGCAAACGGAGGTCCGAGGCGGTGTTGGCGTCACACTTGCATGTAAAAGGCGGAAGACTGTGGATATTGTAGACCTTCAAACCGTGGCCTCAAGTAACTACAACCTCCATTCAGGTGAAAAGAAATCCGAGACACCACCCAAATCGGATTGGGAGCAAGAGGTGATGGAGATAATCCGTCAAGTTCAAGCAAGTTCGAACATAAACTTCGGAAATAAAGGTATATAG 1548 0.4432 MHKPETRIGCQAKLSVYLDKNENNWKVRKVVTKHNHELAPVGMVHLIASHRQLNEAAKAQIDGMHAHGIATSKILGYMACVTGGYSLLGFLKKDAYNYANKARRAKLVDGDANAALVYLEGKAASDPMSIARYGMNADERLGNLIWADGINAFVNKFSKSTHSILEMIQNLELVVREYRSKEILLQFNSIHTVPVMTTCLKSIKSAAAKVYTREVFSDVKKEIEKAGAVNLVRKRRCLNTMVYTLEEYGKPNMHIMACFGRAGKLECQCNIWRRNGYPCRHIFFVMKVEHLAEIPEPLVLKRWRLDAKFPDKYVENWEDSSERGYLLRHGALYSASQWLFFLGAHNLAMFRKAMDGIVSLCEILEADCKFRTARDGIKDAKGVVKDPEVAKSKGVSKMAKTVHSKRRRCTSCKRTGHTKRNCPKRRTRKNPRAENDCVDPSQTEVRGGVGVTLACKRRKTVDIVDLQTVASSNYNLHSGEKKSETPPKSDWEQEVMEIIRQVQASSNINFGNKGI 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02688 515 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 157 420 IPR031052 GO:0006355
Adu04g02688 515 MobiDBLite consensus disorder prediction 412 427 - -
Adu04g02688 515 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 6 148 IPR031052 GO:0006355
Adu04g02688 515 Pfam FAR1 DNA-binding domain 2 39 IPR004330 -
Adu04g02688 515 PANTHER OS02G0262500 PROTEIN 157 420 - -
Adu04g02688 515 ProSiteProfiles Zinc finger CCHC-type profile. 407 424 IPR001878 GO:0003676|GO:0008270
Adu04g02688 515 PANTHER OS02G0262500 PROTEIN 6 148 - -
Adu04g02688 515 MobiDBLite consensus disorder prediction 412 439 - -
Adu04g02688 515 SUPERFAMILY Retrovirus zinc finger-like domains 397 430 IPR036875 GO:0003676|GO:0008270
Adu04g02688 515 ProSiteProfiles Zinc finger SWIM-type profile. 243 290 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02688 Adu-Chr4 114330522 114332941 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu04g02688 FAR1 1.1e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02688 - - ahf:112769548 377.481