Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02680 AGTGAAGCAAATGCCCTCTTAAAGTGGAAGGCCAGCCTGGAGAACCAAAGCCAAGTTGCCTTATCATCTTGGAAGAACGGGACAAGCCCATGCAGATGGACAGGAATTCAATGTGATAGATCCAATTCCGTAACCGCCATCAATCTTGAAAATTATCTTCTCAAAGGTACACTCCACGCTCTAGACTTTTCCTCACTCCCCAACCTCCTCACCTTTAACATCTACAACAACTTCTTTCATGGAACCATTCCCCCACAAATTGGTAACATGTCCAAAATCAATCGTTTGAACTTCTCTTTGAATCCTTTTGATGGTTCCATCCCTCAAGAGATGTGGACACTGAGAAGCATACGCTGGCTTGATCTTTCCTTCTGTAATTATCTAACAGGACCCATCCCTTCTTCCATTGCAAATTTGACAAACTTATCATATCTAGATTTAGGAGGCAACAATCTCTCCTGCTCCATTCCTCCTACAATTGGCAAACTGAACAACCTTGCCTTTTTTTCTATCGAGTCTAGTAAGATTGGAGGTTCCATTCCCCATGAAATCGGAATGTTGTCAAATCTAGAGTATCTTGATTTCATAGGAAACGATCTCACTGGCAATATCCCTTCTACAATTGCTAATATGAGCAAAAACCTTTTGTTTCTTGGTATTGCTGAGAATAATCTTGATGGTTCCATTCCCCATGAAATTGGCATGTTAACAAATCTTGAGTATCTTGATTTGTCAGGAAATGTTCTCTCTGGTAATATCCCTTCTACAATTAGTAACATGACCAATTTGCATGAAGTTTCAATTTCTAATAACACCCTCAATGGCTCAATCCCTTCCTCCATTGGGAGCATGTCTAACTTGACATTGCTATGGCTTGATGGCAATCAACTTTCTGGATCCATCCCTGCATCCATAGGAAACTTGTCTAGTCTCTATTCGCTTCAACTCGATTCGAATAGCCTCACCGGATCCATTCCTTCCACAATTGGAAACATGACAAGTCTTGTTGAGATTTTTCTCCGCTTTAACAATCTTTCAGGACACATTCCTGCCTCTGTTGGCAATTTGATCAGCTTGGAATCCTTATATCTCCAAGGAAACAATCTCTCTGGATCTATTCCTGACTCAATTGGAAACTTGAAAAGCCTCTCCATTCTTGAACTGTCCTTTAACAAACTCACTGGAACCATTCCACACTCAATTAATAACATTACCAACATGATTGACTTTCTAGTAGCCTCAAATAATCTCACTGGTCAATTGCCACCTCACATTTGCTTAGGTGGTTCATTGAAGTTCTTCAATGTTGATCACAACCATTTCACTGGTCCAGTACCAAGTACCTTCAAGAACTGCTCTAGTCTTGTTAGAATAAGGTTAGAGCAGAACCATTTGAAGGGAGACATATCACAAGATTTTGGCATTTATCCTAATTTGGTGCATATTGACCTGAGTGACAACAAATTTTATGGTCAAATTTCACCAAACTGGGGGAAGAGCCATAATCTTCAGAACTTGTTGATGTCCAATAATAATATTTCTGGTGCTATACCAATACAAATTGTTGAGGCTACCAATCTAGGAAGGCTTCATCTTTCTTCTAATCATTTGAGTGGAAAGATTCCAAATGAAATAAGAAATATGAGAAGCCTGTTTGAACTCAAGATCAGCAACAATCATCTTTCAGGAAACATTCCATCAGATATAGGATCATTGCATGGTCTTCAAATCTTAGACCTAGCAGGAAATGAATTGAGTGGCAACATACCAAGACAAGTTGTGCAGTTACCCAACTTGTTGGAATTGAATTTGAGCAACAACAAACTAGAGGGAAGTATCCCGTCTGATTTTCAATCACTGCAAACTCTTTACTCTCTTGATCTTAGCTGCAATTTGTTGAATGGACCGATACCAAAAGTTCTTGGAGAGTTGAAGGAATTGCGATCATTGAACCTTTCACACAACAATCTTTCTGGGACAGTTCCATCAAGCTTTGATGCCATGTCAAGCTTGATTTCTGTCAACATATCATACAATCAACTAGAAGGCCCTCTTCCAAACAATAAAGCCTTTCTTAGTTCTTCAATTGAATCATTGAAAAATAACAAAGGCTTGTGTGGTAATGTCTCTGGCTTGGTGCCATGTCCAAGCAATCTTATCAGCAAAAATCACAAGGTCATGTTATTGGTATTACTTCTTGTCTTTGGAGTACTAGTACTTGTGCTTTCTGTGGTGGCTATTTCTGTATATATTCTTTGTAGAAAAGCAAGAAAGAAAACAGGCACAAATCAAGAAACACAGCCAAAAGAACTTTTTTCCATATGGAGCCATGATGGGAAAATGGCATTTGAAACTATCATTGAAGCCACCAACAATTTTGATGACAAATATATCATTGGAATTGGAGGGCAAGGATCTGTTTACAGGGCTGAGTTGCCTTCAGGTATGGTTGTTGCTGTGAAGAAGCTTCATACAGAAACATCCAACTTGAAATCATTTGAAAATGAGATCCAATCATTGACAGAAATCAGGCACCGAAACATCATAAAGCTGTATGGTTTTTGCCAGCACTCGCGGTTCTCATTTCTGGTTTATAAGTTCTTGGAAGGTGGAAGCTTGGATCAAGTACTAAGAGATGAAACACATGCAACTCTGTTTGATTGGAAAAAGAGGGTGAATGTGGTTAAAGGAGTCGCAAATGCTTTGTCATACATGCATCATGATTCCATACCCCCTATTGTTCATCGTGACATATCAAGCAAGAATGTTCTTCTAGATTCAGACTATGAAGCTCATGTATCTGATTTTGGAACAGCCAAGTTCTTGAAACCTGGGTCAAGTTGGACAACACTTGCAGTAACCTTTGGCTATGCAGCTCCAGAACTAGCTCAGACAATGGAAGTGACAGAGAAATGTGATGTATATAGCTTTGGAGTGCTTTGTTTGGAGATTCTTATGGGAAAGCATCCTGGGGATCTGATAAGTTCATTGTTGTCACCATCAACAGCATTAATCAGTTGCAATTTGTTATTGGTTGAAGTCATAGATCAGAGACCTCCACATCCTGAAGAATTAATGGTTGGTGATATCATGAAGATCATAAAGTTGGCACTGAATTGCTTGAGCCACAATCCACAATCTCGACCAAGTATGCATCAAGTGTCCAAAGAGCTTATGATGGGAAAATTGCCTTTTGCTAATCACCAGTTTCCTATCATCAGAATTGGACAGCTCAATGAAGAATGGCAAACTCCACTTATATGA 3264 0.3931 SEANALLKWKASLENQSQVALSSWKNGTSPCRWTGIQCDRSNSVTAINLENYLLKGTLHALDFSSLPNLLTFNIYNNFFHGTIPPQIGNMSKINRLNFSLNPFDGSIPQEMWTLRSIRWLDLSFCNYLTGPIPSSIANLTNLSYLDLGGNNLSCSIPPTIGKLNNLAFFSIESSKIGGSIPHEIGMLSNLEYLDFIGNDLTGNIPSTIANMSKNLLFLGIAENNLDGSIPHEIGMLTNLEYLDLSGNVLSGNIPSTISNMTNLHEVSISNNTLNGSIPSSIGSMSNLTLLWLDGNQLSGSIPASIGNLSSLYSLQLDSNSLTGSIPSTIGNMTSLVEIFLRFNNLSGHIPASVGNLISLESLYLQGNNLSGSIPDSIGNLKSLSILELSFNKLTGTIPHSINNITNMIDFLVASNNLTGQLPPHICLGGSLKFFNVDHNHFTGPVPSTFKNCSSLVRIRLEQNHLKGDISQDFGIYPNLVHIDLSDNKFYGQISPNWGKSHNLQNLLMSNNNISGAIPIQIVEATNLGRLHLSSNHLSGKIPNEIRNMRSLFELKISNNHLSGNIPSDIGSLHGLQILDLAGNELSGNIPRQVVQLPNLLELNLSNNKLEGSIPSDFQSLQTLYSLDLSCNLLNGPIPKVLGELKELRSLNLSHNNLSGTVPSSFDAMSSLISVNISYNQLEGPLPNNKAFLSSSIESLKNNKGLCGNVSGLVPCPSNLISKNHKVMLLVLLLVFGVLVLVLSVVAISVYILCRKARKKTGTNQETQPKELFSIWSHDGKMAFETIIEATNNFDDKYIIGIGGQGSVYRAELPSGMVVAVKKLHTETSNLKSFENEIQSLTEIRHRNIIKLYGFCQHSRFSFLVYKFLEGGSLDQVLRDETHATLFDWKKRVNVVKGVANALSYMHHDSIPPIVHRDISSKNVLLDSDYEAHVSDFGTAKFLKPGSSWTTLAVTFGYAAPELAQTMEVTEKCDVYSFGVLCLEILMGKHPGDLISSLLSPSTALISCNLLLVEVIDQRPPHPEELMVGDIMKIIKLALNCLSHNPQSRPSMHQVSKELMMGKLPFANHQFPIIRIGQLNEEWQTPLI 1087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02680 1087 Pfam Protein kinase domain 795 1056 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02680 1087 Gene3D Ribonuclease Inhibitor 1 151 IPR032675 -
Adu04g02680 1087 Gene3D Phosphorylase Kinase; domain 1 753 867 - -
Adu04g02680 1087 PANTHER LRR RECEPTOR-LIKE KINASE 1 138 - -
Adu04g02680 1087 PANTHER LRR RECEPTOR-LIKE KINASE 127 271 - -
Adu04g02680 1087 Pfam Leucine Rich Repeat 141 163 IPR001611 GO:0005515
Adu04g02680 1087 Pfam Leucine Rich Repeat 238 259 IPR001611 GO:0005515
Adu04g02680 1087 Pfam Leucine Rich Repeat 598 620 IPR001611 GO:0005515
Adu04g02680 1087 Pfam Leucine rich repeat N-terminal domain 2 39 IPR013210 -
Adu04g02680 1087 SMART LRR_typ_2 644 667 IPR003591 -
Adu04g02680 1087 SMART LRR_typ_2 548 572 IPR003591 -
Adu04g02680 1087 SMART LRR_typ_2 308 332 IPR003591 -
Adu04g02680 1087 SMART LRR_typ_2 187 211 IPR003591 -
Adu04g02680 1087 SMART LRR_typ_2 596 619 IPR003591 -
Adu04g02680 1087 SMART LRR_typ_2 284 307 IPR003591 -
Adu04g02680 1087 SMART LRR_typ_2 236 260 IPR003591 -
Adu04g02680 1087 SMART LRR_typ_2 139 163 IPR003591 -
Adu04g02680 1087 SMART LRR_typ_2 66 90 IPR003591 -
Adu04g02680 1087 SMART LRR_typ_2 356 380 IPR003591 -
Adu04g02680 1087 Gene3D Ribonuclease Inhibitor 152 214 IPR032675 -
Adu04g02680 1087 Gene3D Ribonuclease Inhibitor 337 409 IPR032675 -
Adu04g02680 1087 Gene3D Transferase(Phosphotransferase) domain 1 868 1065 - -
Adu04g02680 1087 PANTHER LRR RECEPTOR-LIKE KINASE 268 1078 - -
Adu04g02680 1087 ProSitePatterns Tyrosine protein kinases specific active-site signature. 913 925 IPR008266 GO:0004672|GO:0006468
Adu04g02680 1087 ProSiteProfiles Protein kinase domain profile. 793 1066 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02680 1087 SUPERFAMILY L domain-like 410 491 - -
Adu04g02680 1087 SMART LRR_sd22_2 644 667 - -
Adu04g02680 1087 SMART LRR_sd22_2 380 406 - -
Adu04g02680 1087 SMART LRR_sd22_2 236 262 - -
Adu04g02680 1087 SMART LRR_sd22_2 572 598 - -
Adu04g02680 1087 SMART LRR_sd22_2 187 213 - -
Adu04g02680 1087 SMART LRR_sd22_2 284 310 - -
Adu04g02680 1087 SMART LRR_sd22_2 332 358 - -
Adu04g02680 1087 SMART LRR_sd22_2 139 168 - -
Adu04g02680 1087 SUPERFAMILY RNI-like 47 392 - -
Adu04g02680 1087 Coils Coil 823 843 - -
Adu04g02680 1087 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 268 1078 - -
Adu04g02680 1087 Pfam Leucine rich repeat 310 369 IPR001611 GO:0005515
Adu04g02680 1087 Pfam Leucine rich repeat 622 681 IPR001611 GO:0005515
Adu04g02680 1087 Gene3D Ribonuclease Inhibitor 410 716 IPR032675 -
Adu04g02680 1087 SUPERFAMILY RNI-like 277 689 - -
Adu04g02680 1087 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 138 - -
Adu04g02680 1087 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 127 271 - -
Adu04g02680 1087 Gene3D Ribonuclease Inhibitor 215 336 IPR032675 -
Adu04g02680 1087 SUPERFAMILY Protein kinase-like (PK-like) 776 1058 IPR011009 -
Adu04g02680 1087 ProSiteProfiles Leucine-rich repeat profile. 598 621 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02680 Adu-Chr4 114142383 114198945 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02680 136 960 Receptor kinase-like Gene Family AT4G08850 46.126 0.0 709
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Adu04g02680 Pkinase 7.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02680 - - aip:107635237 1363.59