Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02678 ATAATTATCATCTTTCTGGTTCCATTCCAATGGAAATAGGAATGATGACAAACCTTCATTGGATTGATTTCTCAAGCAACACTCTCTCTGGGGCTATCCCTCCTACCATTGGTAACTTGAGCAATTTGCAACAATTATACCTTTCTAATAACACACTCTCTGGGTCAATTCCACCCTCCATCTGGAACATGTCTAACTTGACCGCATTATATCTTAATAACAATAGCCTTTCTGGATCCATCCCTGCTTTCATAGAAAACTTGGCCAATTTAGATTCCCTTGCACTCGATGAGAATTACTTTTCTGGATCCATTCCTTCCACATTGGGAAACTTGACAAAGCTCTTCAGATTACACCTCGGCTTTAATAATTTTTCTGGACCAATTCCTTCCTCTATAGGTAATCTGGTCAATTTGAATTACTTGAGCTTCCATACAAACAACTTCTCTGGAACTGTCCCTGAAACAATTGGAAACTTGAAAGGCCTCCAGGAGCTAGAATTTTCCACCAACAAGTTTAATGGCACCCTTCCACAGGGCCTTAATAACTTGACAAGTTTGAAGATGTTTTCAGTGTCCAATAACAATTTCATTGGCCGTTTGCCAACTCAAATCTGCTCAGGTGGATTACTCTCAGACTTCAATGCTGAGAACAACCATTTTACTGGTTCAGTGCCAAGAAGCTTGAAGAGTTGCTCTAACATTGCTAGACTCACATTACAGGGAAACCAGTTGGAAGGTGACATTGCAGAATTTTTCGGCATATATCCGAATTTAGTACATATTGATCTGAGTGATAACAAGTTTTACGTGGCCCAAAACAATTTCACCGGTCATTTGCCACCTCAAATATGCTCAGGTGGGTCACTCATGTTCTTTGGTGCTGAGCACAACCATTTTACTGGCCCAGTTCCAAGAAGCTTGAAGAATTGCTCTAGTATTGTTAGAATCAAATTAGAGGGAAACCAGTTGGAAGGTGACATAGCAAAAGACCTTGGCATATATCCCAATTTGAAACATATTGATTTGAGTGATAATAAATTTTATGGCCAAATTTCATCAAACTGGGGCAAATGTCATAGTCTTGAGAACTTTATCATATCCAACAATAATGTTTCCGGTGGTATACCACCACAAATTGTGAAGGCTACCAAACTTGGCAGGATTCACCTTTCCTCAAACCGATTGACAGGGAAGATTCCGAAAGAATTAGGGAGAATGAAAAGTTTGCTTGAACTCAAGATCAGTGATAATCTTCTCTCAGGAAACATTCCAACAGAATTAGGATCACTGCAGAATTTGCAAATCTTGCATCTAGCAGGAAATGAGTTGAGTGGTAACATACCAACAGAAGTTGTTGAGTTACCCAACTTGTTGGAATTGAATTTGAGCAACAACAAGCTAGAGGGAAGCATCCCCTCTCACTTTGGTTCATTCCAACCTCTCTCTTCTCTTGATCTTAGCAGGAATTTCTTGAATGGAACTATTCCAAATGTGCTTGGACAGTTGACGCACTTGCAGTTGTTGAACCTCTCACACAATAATCTCTCTGGCAATATTCCATCCACTTTTGGTGGCATGTCAACCTTGACATCTGTCAATGTATCATACAACCAGTTAGAAGGGCCGCTTCCAGAAAGTAAGGCCTTTCGCACTGCTACAATTGAGTCACTGAAAGGTAACAAAGGCTTGTGTGGTAATGTCACTGGCTTGGTGCAATGCAAAACTAATAGCTATAGCCAAAAGAGTCACAAGGCCACGCTATTAGTATTGTTTCTTATCTTTGGAATACTAGTACTTGTGCTCTGTGTGGTGGGTGTTTCAATGTATATTATTTGTAGAAGTGTGAGAAAGAAAGGAGACTCAGCCAAAGAAATACAATCAGAAGAACATTTTTCCATATGGAGCCATGATGGAAAAATGGCATTTGAAACAATCATTGAAGCTACCAAGAATTTTGATGACAAATATCTCATTGGAATTGGAGGGCAAGGATCTGTTTACAGAGCTGAGTTACCTTCAGGTATGGTTGTTGCTGTGAAGAAAATTCATGCAGAATCAGATCCAGAGGACAAGTCCAATTTGAAATCATTTAAAAGTGAAATCGAAGCACTGACAGAAATCAAGCACCGCAACATCATAAAGCTATATGGATTTTGCCAGCATTCCCGGTTCTCTTTTTTGGTTTATGAATTCTTGGAAGGTGGCAGTGTGGATCAAGTACTAAGCAATGAAGCACAAGCAAGTGCATTTGATTGGAAGAAGAGAGTGAATGTGGTTAGAGGAGTTGCTAATGCTTTATCATATATCCATCATGGTTGCGTGCCCCCTATAGTTCATCGTGACATATCAAGCAAGAATATTCTTTTGGATTCAGAAGATGAAGCTCATGTCTCTGATTTTGGGACCGCGAAGTTTCTAAAGCCAGGTTCAAATTGGACCACACTTGCAGTCACCTATGGCTATGGTGCTCCAGAGCTTGTTCAAACTATGGAAGTGACTGAAAAATGTGATGTATATAGTTTTGGAGTGCTTTGTTTCGAAATCCTTATGGGAAAGCATCCGGCAGATCTGATCAATTCATTGTTGTCGCCATCAACAGCTTCAATAACATACAATTTGCTATTGGTTGATGTAATTGATCAAAGGCCTCCTCATCCTGAGAAGTCAGTTGTTGGGGAAATCATGTTGATCACAAAGTGGGCGCTTGAGTGTTTGAGCCAAAGTCCACAATTTCGGCCAACCATGCATCAAGTGTCTAAAGAACTCATGATGGGAAAATCATCTTTCTCTGACGAGCACTTTCCCATGATTAGACTTGGACAACTCAATGAAGAGTTATTGGAATCTCCACTCGTGTGA 2861 0.4009 NYHLSGSIPMEIGMMTNLHWIDFSSNTLSGAIPPTIGNLSNLQQLYLSNNTLSGSIPPSIWNMSNLTALYLNNNSLSGSIPAFIENLANLDSLALDENYFSGSIPSTLGNLTKLFRLHLGFNNFSGPIPSSIGNLVNLNYLSFHTNNFSGTVPETIGNLKGLQELEFSTNKFNGTLPQGLNNLTSLKMFSVSNNNFIGRLPTQICSGGLLSDFNAENNHFTGSVPRSLKSCSNIARLTLQGNQLEGDIAEFFGIYPNLVHIDLSDNKFYVAQNNFTGHLPPQICSGGSLMFFGAEHNHFTGPVPRSLKNCSSIVRIKLEGNQLEGDIAKDLGIYPNLKHIDLSDNKFYGQISSNWGKCHSLENFIISNNNVSGGIPPQIVKATKLGRIHLSSNRLTGKIPKELGRMKSLLELKISDNLLSGNIPTELGSLQNLQILHLAGNELSGNIPTEVVELPNLLELNLSNNKLEGSIPSHFGSFQPLSSLDLSRNFLNGTIPNVLGQLTHLQLLNLSHNNLSGNIPSTFGGMSTLTSVNVSYNQLEGPLPESKAFRTATIESLKGNKGLCGNVTGLVQCKTNSYSQKSHKATLLVLFLIFGILVLVLCVVGVSMYIICRSVRKKGDSAKEIQSEEHFSIWSHDGKMAFETIIEATKNFDDKYLIGIGGQGSVYRAELPSGMVVAVKKIHAESDPEDKSNLKSFKSEIEALTEIKHRNIIKLYGFCQHSRFSFLVYEFLEGGSVDQVLSNEAQASAFDWKKRVNVVRGVANALSYIHHGCVPPIVHRDISSKNILLDSEDEAHVSDFGTAKFLKPGSNWTTLAVTYGYGAPELVQTMEVTEKCDVYSFGVLCFEILMGKHPADLINSLLSPSTASITYNLLLVDVIDQRPPHPEKSVVGEIMLITKWALECLSQSPQFRPTMHQVSKELMMGKSSFSDEHFPMIRLGQLNEELLESPLV 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02678 952 PANTHER LRR RECEPTOR-LIKE KINASE 269 942 - -
Adu04g02678 952 SUPERFAMILY Protein kinase-like (PK-like) 633 922 IPR011009 -
Adu04g02678 952 SMART LRR_typ_2 183 207 IPR003591 -
Adu04g02678 952 SMART LRR_typ_2 406 430 IPR003591 -
Adu04g02678 952 SMART LRR_typ_2 111 135 IPR003591 -
Adu04g02678 952 SMART LRR_typ_2 454 477 IPR003591 -
Adu04g02678 952 SMART LRR_typ_2 502 525 IPR003591 -
Adu04g02678 952 SMART LRR_typ_2 39 62 IPR003591 -
Adu04g02678 952 SMART LRR_typ_2 63 87 IPR003591 -
Adu04g02678 952 Gene3D Ribonuclease Inhibitor 104 205 IPR032675 -
Adu04g02678 952 PRINTS Leucine-rich repeat signature 481 494 - -
Adu04g02678 952 PRINTS Leucine-rich repeat signature 502 515 - -
Adu04g02678 952 Pfam Leucine rich repeat 17 76 IPR001611 GO:0005515
Adu04g02678 952 Pfam Leucine rich repeat 481 539 IPR001611 GO:0005515
Adu04g02678 952 SUPERFAMILY RNI-like 3 269 - -
Adu04g02678 952 Gene3D Ribonuclease Inhibitor 1 103 IPR032675 -
Adu04g02678 952 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 3 60 - -
Adu04g02678 952 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 269 942 - -
Adu04g02678 952 SUPERFAMILY L domain-like 271 565 - -
Adu04g02678 952 Gene3D Transferase(Phosphotransferase) domain 1 732 934 - -
Adu04g02678 952 Gene3D Phosphorylase Kinase; domain 1 613 731 - -
Adu04g02678 952 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 44 269 - -
Adu04g02678 952 Pfam Leucine Rich Repeat 456 478 IPR001611 GO:0005515
Adu04g02678 952 Gene3D Ribonuclease Inhibitor 270 576 IPR032675 -
Adu04g02678 952 Gene3D Ribonuclease Inhibitor 206 269 IPR032675 -
Adu04g02678 952 ProSiteProfiles Protein kinase domain profile. 652 924 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02678 952 PANTHER LRR RECEPTOR-LIKE KINASE 3 60 - -
Adu04g02678 952 PANTHER LRR RECEPTOR-LIKE KINASE 44 269 - -
Adu04g02678 952 Pfam Protein kinase domain 654 920 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02678 952 ProSitePatterns Tyrosine protein kinases specific active-site signature. 777 789 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02678 Adu-Chr4 114030965 114102458 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02678 15 824 Receptor kinase-like Gene Family AT4G08850 43.114 0.0 661
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Adu04g02678 Pkinase 3.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02678 - - aip:107635237 1108.59