Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02676 ATGTCGAGAAAAAATCTCTTAATATTCCTCTTCTATGTCCTTGTGAAACTCTCTTGTGTGGCTTTAGCTGCAAGTGATGAGAAGAATGAAGAAGCAAATGCACTCTTAAAGTGGAAGACCACCCTTGATAACAAAAGCCAACTTATCTTGTCATCTTGGAACAACGGCACAAGTCCATGCAGATGGAAAGGAATTCAGTGTGACAAATCAAAGTCAATCACAACCATGAACATTGAAAATTTTGGACTCAAAGGTACACTCCACACTCTCACCTTCTCTTCATTCCCAAACCTCCTCAGCATAAACATATACAACAACTTGTTCCATGGAACCATTCCCCCACAGATTGGTAACTTGTCCAGAGTTAATCAATTGAACTTGTCCAAAAATTTCTTTGAAGGTTCCATTCCTAGAGAGATCTTCACCTTGACAAGTCTCCACGGGCTTGATCTTTTCGAATGCCATCTAAGTGACCAAATCCCTGAGTCCATAGGAAATTTGGCCAACTTAACATATCTAGATTTTGGAAACAACAATCTTTCTGGCCACATTCCTACTGGGATTGGCAAATTGGTCAACCTTGAGTATCTTTCTTTCATAGATAATTATCATCTTTCTGGTTCCATTCCAATGGAAATAGGAATGATGACAAACCTTCATACGATTGATTTCTCAAGCAACACTCTCTCTGGGGCTATCCCTCCTACCATTGGTAACTTGAGCAATTTGCAACAATTATACCTTTCTAATAACACACTCTCTGGGTCAATTCCACCCTCCATCTGGAACATGTCTAACTTGACCTTGTTATATCTTAATAGCAATAACCTTTCTGGATCCATCCCTGCTTCCATAGAAAACTTAGCCAACTTAGATTCCCTTGCACTTGATAACAATCACTTTTCTGGATCCATTCCTTCCACATTGGGAAACTTGACAAAGCTCTTCGAATTATACCTCGGCTTTAATAATTTTTCTGGACCAATTCCTGCCTCTATAGGTAATCTGATCAATTTGAATTACTTGAGCTTCCATACAAACAACCTCTATGGAACTGTCCCTGAAACAATTGGAAACTTGAAAGGCCTCAATATGCTAGAATTGGCCACCAACAAGTTTAATGGCACCCTTCCACAGGGCATTAATAACTTGACAAGTTTGAACACCCTTTCCGTGTCCAATAACATTTTCATTGGCCATTTGCCAACTCAAATCTGCTCAGGTGGATTACTCTCATACTTCAATGCTGAGAACAACCATTTTACTGGATCAGTGCCAAGAAGTTTGAAGAGTTGCTCTAACATTGCTAGACTCACATTACAGGGAAACCAGTTGGAAGGTGACATTGCAGAAATTTTCGGCATATATCCGAATTCAGTACATATTGATCTGAGTGATAACAAGTTTTATGGTCAGATTTCACCAAACTGGGGAAAGAGCCATAACCTTCAGAACTTGTACATGTCCAACAACAATATTTCTGGTGCTATACCACCACAAATTGTTGAGGCTACTAATCTGGGTAGGCTTCGCCTTTCTTCAAACCAACTGAATGGAAAGATTCCAAAGGAACTAGGGAATATGAAAAACTTGTTTGAACTCAGTATCAGTAACAATCATCTCTCAGGAAACATTCCACCAGAAATAGGATCATTGAAGAATCTGACAATCTTGCACCTAGCAGGAAATGAGTTGAGCGGCAACATACCAAGAGAAGTTATGCAGTTACCCAAATTGGTTGAATTGAACTTGAGCATCAACAGACTAGAGGGAAGCATCCCCTCTGGCATTGCTTCATTGAAACCTCTCTCTTCTCTTGATCTTAGCAACAATTTGTTGAATGGAACAATACCAAGGTGGCTTGGAGATCTGACGCAATTGAACTTCTTGAACCTCTCTCACAATGATCTCTCTGGCAATATTCCATCCAGTTTTGATGGCATGTCAGCCTTGATTTCTGTCAACATATCACACAACCAGTTAGAAGGGCCGCTTCCAAACAATCAAGCTTTTCTTAATGCTCCAATTTGGTCCTTGATTAGTAACAAAGGCTTGTGTGCTAACAATGTCACCGGCTTGGAGGGATGCACAAAGAAGCATAGCCTGAAGATGGTATTGTTTCTTATCTTTGGAGCACTTGCTCTAGCACTTTGTTTGTTAGGTGTTTCAATGTATATTCTTTGCAGAAGAGGCAGAAAGAGAGAAGTTAAAGAAGTGCAATCAAAAGAGCACTTTTCCATATGGAGCCATGATGGGAAAATGGCATTTGAAACAATCATTGAAGCTACCAATAATTTTGATGACAAATATCTCATTGGAAATGGAGGGCAAGGATCTATTTACAAGGCTGAGTTGCCTTCAGGTATGGTTGTTGCAGTGAAGAAGCTTCATGAGAAGACTGCTATTGGGGAGGAGACATACAATTTGAAAGCATTTGAGAATGAAATCAAAGCATTGACAGAAATGAAGCACCGCAACATGATAAAGCTATATGGGTTTTGCCAACATTCACGGTTCTCATTTTTGGTTTATAAGTACTTGGAAGGTGGAAGCTTGGATCAAGTGCTAAGAGATGAAGCGGAAGCAAGTAAATTTGATTGGGGAAAGAGGGTGAATGTGATTAAAGGAGTTGCTAATGCTCTATCATATATGCATCATGATTGCATACCTCCTATACTTCATGGCGACATATCGAGCAAGAATGTCCTTTTGGATTCAGAATATGAAGCTCATGTCTCTGATTTTGGGACAGCTAAGTTTCTTAAGCCGGATTCAAGTTGGACAACACTTGTAGTCACCTATGGATACGGAGCTCCTGAGCTAGCTCAGACTATGGAAGTGACAGAGAAAAGTGATGTATATAGCTTTGGAGTGCTTTGTTTGGAGATCCTCATGGGAAAGCATCCAGGAGATTTGATCAACTCATTGTTGTCGCCAACAACAGCATCAGTAACATACAATTTGTTATTGGTTGATGTGATGGATCAGAGGCCACCCCATCCTAAGAATTCAATTGTTGAGGAAATCATGTGGATCACAAAGTGGGCACTTGAGTGCTTGAGACAAAGTCCACAATCTCGACCAAGCATGCATCAGATTTCTAAAGAGCTTATGATGGGAAAGTCACCTTTAGCTAATCACCAGTTTCCTATGATCAGAATTGGGCAACTCATTGAAGAAGGATCGGGGAGTGCACTTACGTGA 3204 0.402 MSRKNLLIFLFYVLVKLSCVALAASDEKNEEANALLKWKTTLDNKSQLILSSWNNGTSPCRWKGIQCDKSKSITTMNIENFGLKGTLHTLTFSSFPNLLSINIYNNLFHGTIPPQIGNLSRVNQLNLSKNFFEGSIPREIFTLTSLHGLDLFECHLSDQIPESIGNLANLTYLDFGNNNLSGHIPTGIGKLVNLEYLSFIDNYHLSGSIPMEIGMMTNLHTIDFSSNTLSGAIPPTIGNLSNLQQLYLSNNTLSGSIPPSIWNMSNLTLLYLNSNNLSGSIPASIENLANLDSLALDNNHFSGSIPSTLGNLTKLFELYLGFNNFSGPIPASIGNLINLNYLSFHTNNLYGTVPETIGNLKGLNMLELATNKFNGTLPQGINNLTSLNTLSVSNNIFIGHLPTQICSGGLLSYFNAENNHFTGSVPRSLKSCSNIARLTLQGNQLEGDIAEIFGIYPNSVHIDLSDNKFYGQISPNWGKSHNLQNLYMSNNNISGAIPPQIVEATNLGRLRLSSNQLNGKIPKELGNMKNLFELSISNNHLSGNIPPEIGSLKNLTILHLAGNELSGNIPREVMQLPKLVELNLSINRLEGSIPSGIASLKPLSSLDLSNNLLNGTIPRWLGDLTQLNFLNLSHNDLSGNIPSSFDGMSALISVNISHNQLEGPLPNNQAFLNAPIWSLISNKGLCANNVTGLEGCTKKHSLKMVLFLIFGALALALCLLGVSMYILCRRGRKREVKEVQSKEHFSIWSHDGKMAFETIIEATNNFDDKYLIGNGGQGSIYKAELPSGMVVAVKKLHEKTAIGEETYNLKAFENEIKALTEMKHRNMIKLYGFCQHSRFSFLVYKYLEGGSLDQVLRDEAEASKFDWGKRVNVIKGVANALSYMHHDCIPPILHGDISSKNVLLDSEYEAHVSDFGTAKFLKPDSSWTTLVVTYGYGAPELAQTMEVTEKSDVYSFGVLCLEILMGKHPGDLINSLLSPTTASVTYNLLLVDVMDQRPPHPKNSIVEEIMWITKWALECLRQSPQSRPSMHQISKELMMGKSPLANHQFPMIRIGQLIEEGSGSALT 1067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02676 1067 PRINTS Leucine-rich repeat signature 603 616 - -
Adu04g02676 1067 PRINTS Leucine-rich repeat signature 624 637 - -
Adu04g02676 1067 ProSitePatterns Tyrosine protein kinases specific active-site signature. 892 904 IPR008266 GO:0004672|GO:0006468
Adu04g02676 1067 SUPERFAMILY Protein kinase-like (PK-like) 749 1037 IPR011009 -
Adu04g02676 1067 Gene3D Ribonuclease Inhibitor 27 182 IPR032675 -
Adu04g02676 1067 Pfam Protein kinase domain 768 1035 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02676 1067 Pfam Leucine rich repeat 582 637 IPR001611 GO:0005515
Adu04g02676 1067 Pfam Leucine rich repeat 218 277 IPR001611 GO:0005515
Adu04g02676 1067 Gene3D Ribonuclease Inhibitor 183 236 IPR032675 -
Adu04g02676 1067 SMART LRR_typ_2 384 408 IPR003591 -
Adu04g02676 1067 SMART LRR_typ_2 119 143 IPR003591 -
Adu04g02676 1067 SMART LRR_typ_2 167 191 IPR003591 -
Adu04g02676 1067 SMART LRR_typ_2 624 647 IPR003591 -
Adu04g02676 1067 SMART LRR_typ_2 336 360 IPR003591 -
Adu04g02676 1067 SMART LRR_typ_2 288 312 IPR003591 -
Adu04g02676 1067 SMART LRR_typ_2 264 287 IPR003591 -
Adu04g02676 1067 SMART LRR_typ_2 528 552 IPR003591 -
Adu04g02676 1067 SMART LRR_typ_2 576 600 IPR003591 -
Adu04g02676 1067 SMART LRR_typ_2 240 263 IPR003591 -
Adu04g02676 1067 PANTHER LRR RECEPTOR-LIKE KINASE 156 258 - -
Adu04g02676 1067 PANTHER LRR RECEPTOR-LIKE KINASE 244 1057 - -
Adu04g02676 1067 PANTHER LRR RECEPTOR-LIKE KINASE 11 171 - -
Adu04g02676 1067 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Adu04g02676 1067 SUPERFAMILY L domain-like 430 687 - -
Adu04g02676 1067 Gene3D Ribonuclease Inhibitor 410 703 IPR032675 -
Adu04g02676 1067 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 11 171 - -
Adu04g02676 1067 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 156 258 - -
Adu04g02676 1067 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 244 1057 - -
Adu04g02676 1067 Gene3D Transferase(Phosphotransferase) domain 1 847 1048 - -
Adu04g02676 1067 SUPERFAMILY L domain-like 46 259 - -
Adu04g02676 1067 Gene3D Ribonuclease Inhibitor 237 409 IPR032675 -
Adu04g02676 1067 Gene3D Phosphorylase Kinase; domain 1 728 846 - -
Adu04g02676 1067 SUPERFAMILY L domain-like 200 449 - -
Adu04g02676 1067 ProSiteProfiles Protein kinase domain profile. 766 1050 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02676 1067 SMART LRR_sd22_2 167 199 - -
Adu04g02676 1067 SMART LRR_sd22_2 600 626 - -
Adu04g02676 1067 SMART LRR_sd22_2 216 242 - -
Adu04g02676 1067 SMART LRR_sd22_2 264 290 - -
Adu04g02676 1067 SMART LRR_sd22_2 480 495 - -
Adu04g02676 1067 SMART LRR_sd22_2 312 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02676 Adu-Chr4 113963093 113966682 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02676 7 939 Receptor kinase-like Gene Family AT4G08850 44.433 0.0 731
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Adu04g02676 Pkinase 1.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02676 - - gmx:100815688 1311.98