Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02674 ATGTATCCAAAGATTGAAGGTAGCACATACAGCAGGGGCATTATGATCATGTACCTGTGTGTCCATGTTGTTGCTGCTGCTGCTTCAAGTGAGAAGAGTGAAGCAAGTGCACTCTTAAAGTGGAAGGCCAGCCTTGAGAACACCAGTGTGTTGTCGTCGTGGGCAGGTACGAATCCATGCAAATGGCACGGCATTGCATGTGACAGAGCCAATTCCGTTACGGCAATAAATCTTGAAAATCATAATCTGAAAGGTACACTCCACACTCTCAGCTTCTTATCATTCCCCAACCTCCTCACCTTTAATATCTACAACAACTTCTTCTATGGAACCATACCACCACACATTGGTAACATATCCAAACTCAATACTTTGAACTTGTCTTTGAACGCTTTTGAGGGTACCATCCCTAAGGAGATGTGGACATTGACGAGTTTACGCGGGCTTGATCTTTCCCTGTGTATTTATCTTAGTGGAGTCATACCCAGTTCCATAGCAAATTTGACCAACCTATCATACCTAGATGTAGCCAAGAACAATCTTTCTGGCCACATTCCTCCTGAGATTGGAAATTTGAACAGCCTCAAGTATCTTGATCTGGCAGGTAATAAGCTTAGTGGTTCCATTCCCCACGAAATTGGAATGTTGACAAAGCTTGAGGTACTTGTTTTATCCACAAACATTCTCTTTGGAACTATCCCTTCTACCATTGGTAACCTTAGCAATCTGAATCACTTTTTTGTTTCAAATAACTCCCTCTCTGGCCCAATCCCATCCCTCATATGGAACATGTCTAACTTGTCCTGGCTATACCTTGATGGCAATCGACTATCTGGATCAATCCCTCCTTCCATAGAAAACTTGGCCAATTTGGAACGCTTTGTACTTCATGGAAACAATCTCTCTGGGTCCATTCCTTCCACTGTTGGAAACATGACTAAGCTCATCTACTTGTTCATGCGCGTCAATCATTTTTCTGGATCAATTCCTGTCTCCATAGGTAATTTGATCAACTTGAAAAAACTTAGTCTCCAAGAAAACAATTTCGTCGGATTTATTCCCAACACAATTGGAAACTTAAAGAAGCTCTCGCTGCTTGAATTGTCTTTCAACAATCTTAAAGGTAGCATTCCACCATCCACAAGAAACATGACCAACCTCATGATCTTTTTAGTATCTGAAAATAATTTAACTGGAAATTTGCCACCCCAAATCTGCTCAGGGGGATCACTAGAGTCATTTTGTGCTGATAATAATCACTTTACCGGTCCAGTACCAAGAAGCTTGAAGAATTGCTCTAGTATTCAAAGAATCAGGCTACAAGGTAACCAATTGGAAGGAGATATAGCACAAGATTTTGGCATATATCCAAAGTTGGGATTTATTGATCTAAGTGATAATAAATTTCATGGCCAAATTTCTCCTAACTGGGGGAGGTGCCCAAATCTTGATACCTTGATCATATCCAACAATAATATTTCCGGTAGTATACCCCCACAAATCGCAGAGGCTACTAAACTGGGTAAGCTTCAACTTTCTTCAAACCAATTGACTGGAAGGATACCAAAAGAACTAGGGAATTTGAAGAGCCTGCTTCATCTCGACATAGGCAACAATCAACTTGTAGGAAACATTCCAAAACAAGTTGTAGGGTTGCCTAATTTGTTGGAATTGAACTTGAGCAACAACAGACTAGATGGAAGCATCCCCTCTGAGTTTGATCCAATTCAACCTCTTTATTCTCTTGATCTTAGCGGGAATTCGTTGAATGGAACAATACCATCGGTGCTTGGACAGCTGAAGCAGTTGCAATTGTTGAACCTCTCACACAATAATCTCTCTGGCACAATTCCAAACACTTTTAGTAGCAGTATGTCAAGCTTGATTTCTGTCAACTTATCATACAACCAATTAAAAGGACCGGTTCCAAACGCTAGAGCTTTCCAAACAATTGAGTCACTGAAAAATAACAACGGGTTGTGTGGTAATGTCACTGGCTTGATGCCATGCCCAAGCAGCAGTGCTAGGCACAAAAGTCACACGGTCATGTTATTGGTATTACTTGTTATATTTGCAGTACTAGTGCTTTCTGTGGTGGCTGTTTCATTGTACTTTCTTTGTAAAAGTGCTAGAAACAAAAACAACTCAGCTAAAGAAGTGCAACAAGTAGAAGAACACTTTTCCATATGGAGCCATGACGGAAAAATGGCATTTGAAACTATCATTGATGCTACCAATAATTTTGATGACAAATATCTCATTGGAATTGGAGGGCAAGGATCCGTTTACAGGGCTGAGTTGCCTTCAGGTATGGTTGTTGCTGTGAAGAAGCTTCATAAGGAATCAGATGCAGGGAACAAGTCCAATTTGAAAGCATTTGAGAATGAAATCCAAGCACTGACAGAAATGAAGCACCGCAACATCATAAAGCTATACGGATATTGCCAGCATTCACGCTTCTCATTTTTGGTTTATGAGTTCTTGGAAGGTGGCAGTTTGGATCAAGCACTTGGCAGTGAAAAACAAGCAAGTGCATTTGATTGGGAGAGGAGGGTGAATGTGGTTAAAGGAGTTGCAAATGCTTTGTCATATATGCATCATGATTGCAAACCCCCCATAGTTCACCGTGACATATCAAGCAAGAACATTCTGTTGGACTCAGATTATTATGAAGCTCATGTCTCTGACTTTGGAACTGCTAAGTTTTTGAACCCAGATTCAAATTGGACAACACTTGCAGTCACCTATGGCTATGGAGCTCCAGAGCTAGCTCAGACTATGGAAGTGACAGAGAAATGTGATGTATACAGCTTTGGAGTGCTTTGTTTGGAAATTCTTATGGGAAAGCATCCAGCGGACCTAATAAGTTCATTGTTGTCACCATCAACAGCGAGAATAACATACGATTTGTTATTGGTTGATGTCATAGATCAGAGACCTCCCCTTCCTGAAATATCAATTGTTGGGGAAATAATGTGGATCACAAAGTGGGCACTTGAATGCTTGAGCCAAAGTCCACAATCTCGACCAAGCATGCATCAAGTTTCTAAAGAGCTTATGATGGGAAAATCACGTTTCCCGGATGACCAATTTGCTATGATCAGAATTGGACAACTCAATGAAGAATGGGAAACTCCACTTATGTGA 3147 0.4083 MYPKIEGSTYSRGIMIMYLCVHVVAAAASSEKSEASALLKWKASLENTSVLSSWAGTNPCKWHGIACDRANSVTAINLENHNLKGTLHTLSFLSFPNLLTFNIYNNFFYGTIPPHIGNISKLNTLNLSLNAFEGTIPKEMWTLTSLRGLDLSLCIYLSGVIPSSIANLTNLSYLDVAKNNLSGHIPPEIGNLNSLKYLDLAGNKLSGSIPHEIGMLTKLEVLVLSTNILFGTIPSTIGNLSNLNHFFVSNNSLSGPIPSLIWNMSNLSWLYLDGNRLSGSIPPSIENLANLERFVLHGNNLSGSIPSTVGNMTKLIYLFMRVNHFSGSIPVSIGNLINLKKLSLQENNFVGFIPNTIGNLKKLSLLELSFNNLKGSIPPSTRNMTNLMIFLVSENNLTGNLPPQICSGGSLESFCADNNHFTGPVPRSLKNCSSIQRIRLQGNQLEGDIAQDFGIYPKLGFIDLSDNKFHGQISPNWGRCPNLDTLIISNNNISGSIPPQIAEATKLGKLQLSSNQLTGRIPKELGNLKSLLHLDIGNNQLVGNIPKQVVGLPNLLELNLSNNRLDGSIPSEFDPIQPLYSLDLSGNSLNGTIPSVLGQLKQLQLLNLSHNNLSGTIPNTFSSSMSSLISVNLSYNQLKGPVPNARAFQTIESLKNNNGLCGNVTGLMPCPSSSARHKSHTVMLLVLLVIFAVLVLSVVAVSLYFLCKSARNKNNSAKEVQQVEEHFSIWSHDGKMAFETIIDATNNFDDKYLIGIGGQGSVYRAELPSGMVVAVKKLHKESDAGNKSNLKAFENEIQALTEMKHRNIIKLYGYCQHSRFSFLVYEFLEGGSLDQALGSEKQASAFDWERRVNVVKGVANALSYMHHDCKPPIVHRDISSKNILLDSDYYEAHVSDFGTAKFLNPDSNWTTLAVTYGYGAPELAQTMEVTEKCDVYSFGVLCLEILMGKHPADLISSLLSPSTARITYDLLLVDVIDQRPPLPEISIVGEIMWITKWALECLSQSPQSRPSMHQVSKELMMGKSRFPDDQFAMIRIGQLNEEWETPLM 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02674 1048 SMART LRR_sd22_2 360 381 - -
Adu04g02674 1048 SMART LRR_sd22_2 168 194 - -
Adu04g02674 1048 SMART LRR_sd22_2 528 554 - -
Adu04g02674 1048 SMART LRR_sd22_2 216 242 - -
Adu04g02674 1048 SMART LRR_sd22_2 264 290 - -
Adu04g02674 1048 Gene3D Ribonuclease Inhibitor 186 276 IPR032675 -
Adu04g02674 1048 ProSiteProfiles Leucine-rich repeat profile. 194 216 IPR001611 GO:0005515
Adu04g02674 1048 Gene3D Ribonuclease Inhibitor 31 185 IPR032675 -
Adu04g02674 1048 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 156 249 - -
Adu04g02674 1048 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 534 1039 - -
Adu04g02674 1048 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 247 547 - -
Adu04g02674 1048 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 15 171 - -
Adu04g02674 1048 ProSiteProfiles Protein kinase domain profile. 748 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02674 1048 PANTHER LRR RECEPTOR-LIKE KINASE 15 171 - -
Adu04g02674 1048 PANTHER LRR RECEPTOR-LIKE KINASE 534 1039 - -
Adu04g02674 1048 PANTHER LRR RECEPTOR-LIKE KINASE 156 249 - -
Adu04g02674 1048 PANTHER LRR RECEPTOR-LIKE KINASE 247 547 - -
Adu04g02674 1048 Gene3D Ribonuclease Inhibitor 371 672 IPR032675 -
Adu04g02674 1048 SUPERFAMILY RNI-like 76 398 - -
Adu04g02674 1048 PRINTS Leucine-rich repeat signature 579 592 - -
Adu04g02674 1048 PRINTS Leucine-rich repeat signature 600 613 - -
Adu04g02674 1048 Gene3D Phosphorylase Kinase; domain 1 707 827 - -
Adu04g02674 1048 Pfam Leucine rich repeat 579 638 IPR001611 GO:0005515
Adu04g02674 1048 Pfam Leucine rich repeat 157 205 IPR001611 GO:0005515
Adu04g02674 1048 Pfam Leucine rich repeat 218 277 IPR001611 GO:0005515
Adu04g02674 1048 Pfam Leucine rich repeat 506 565 IPR001611 GO:0005515
Adu04g02674 1048 SUPERFAMILY RNI-like 366 644 - -
Adu04g02674 1048 Pfam Protein kinase domain 750 1017 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02674 1048 SMART LRR_typ_2 360 383 IPR003591 -
Adu04g02674 1048 SMART LRR_typ_2 264 287 IPR003591 -
Adu04g02674 1048 SMART LRR_typ_2 552 575 IPR003591 -
Adu04g02674 1048 SMART LRR_typ_2 528 551 IPR003591 -
Adu04g02674 1048 SMART LRR_typ_2 336 359 IPR003591 -
Adu04g02674 1048 SMART LRR_typ_2 168 191 IPR003591 -
Adu04g02674 1048 SMART LRR_typ_2 192 216 IPR003591 -
Adu04g02674 1048 SMART LRR_typ_2 384 408 IPR003591 -
Adu04g02674 1048 SMART LRR_typ_2 288 312 IPR003591 -
Adu04g02674 1048 SMART LRR_typ_2 600 623 IPR003591 -
Adu04g02674 1048 ProSitePatterns Tyrosine protein kinases specific active-site signature. 873 885 IPR008266 GO:0004672|GO:0006468
Adu04g02674 1048 Gene3D Ribonuclease Inhibitor 277 370 IPR032675 -
Adu04g02674 1048 Pfam Leucine rich repeat N-terminal domain 32 68 IPR013210 -
Adu04g02674 1048 Gene3D Transferase(Phosphotransferase) domain 1 828 1032 - -
Adu04g02674 1048 SUPERFAMILY Protein kinase-like (PK-like) 728 1019 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02674 Adu-Chr4 113864685 113867931 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02674 14 921 Receptor kinase-like Gene Family AT4G08850 42.857 0.0 715
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Adu04g02674 Pkinase 1.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02674 - - aip:107635237 1918.28