Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02671 ATGTCCTCAAAGATTAATAGTAATTTCATGAGGATCATTGTAGCATGCAGGTGGATTCTCTGGCTTGTACAATTGGTTGCTTCTCAAGCCTCAATTGAGGAAGCAATAGCTCTCTTGAAGTGGAAATCCAGCCTTGAGAACCAAAGCCAAGTTGTGTTGTCATCTTGGAAGAACGGGACAAGTCCTTGCAGATGGGGAGGAATTCAATGTGATCATTCCAATTCCGTCGCAATCATGAATCTTGAAAATCTTGGACTCAAAGGTACACTCCACAGTCTCAGCTTCTCTTCATTCCCCAACCTCCTCAGCATAAACATATACAACAACTTTTTCCATGGAACCATTCCCCCACAGATTAGTAACTTGTCAAGAGTTAATCACTTGAACTTTTCTCAAAATTCCTTTGATGGTTCAATCCCTAAAGAAATGTGGACCTTGAAGAGTCTAGAGAGGCTTGATCTTTCCTTGTGTCATCTAAGCGGACAAGCATTGGCCGCTTCCATTTCAAATCTATCCAACTTGTCATTTCTTGATATATCTGACAATTACAATCTGTCTGGCCACATTCCTCCTGAGGTTGGAAAATTGAACAAACTTTTTCGGCTCTCTAGCGGAAGAAATAAATTATTTGGCCCCATTCCGAAAGAAATTGGAATGTTGACAAGCCTCTGGTATCTTGATTTGCAAGGAAACACTCTCTCAGGTACTATCCCCTCTACAATTGGCAACATGACTAATTTGCAACAACTTTACCTTGCTAATAACACTCTCTCAGGCATAATCCCACCCTCCATTTGGAACATGTCTAACTTGACCCTTCTTTGGGTCAATAATAATCAACTTTCCGGATCAATCCCTGCTTCCATAGATAACTTGACCAATATGGATGACCTCACACTCGATAAAAACCACCTATCTGGATCCATTCCTTCCACAATTGGAAACATGACAAAGCTCAACAAATTGTTTCTGCGCCACAACCAGTTTTCTGGATCAATTCCTGCCTCTTTAGGTAACATGAACAATTTGAAAGTCCTCAGCCTTCAAGACAACAACCTCTCCGGATTTATTCCGGCCACTATTGGCCAGTTGCACAAACTCTACCTCCTAGAGTTGTCCTTCAATAAACTTAGTGGCAACATTCCACAGGCCATTAATAACATTAGCAACATTAAGTTTTTTCAAGTAGAAGAAAATAATCTCACCGGACACCTGCCTCCTCAAATTTGCTCTGGTGGATCATTAAAGACCTTCAATGCTGATAACAACCATTTCACTGGTCCAATACCAAGTAGCTTGAAGAATTGCTCTAGTATCAAAAGATTGAAGTTACAGGCTAACCACTTGGAAGGAGATATAGCACACGATTTTGGAATATATCCAAATTTGATACATCTTGATCTGAGTGACAATAGATTGTATGGTCAAATTTCACCAGAATGGGGAAAATCCGATAATCTCGAGAACATGATCCTATCCAACAATAACATCACTGGTGTTATACCGCTACAAATTGCTGAGGCTGCCAAGTTAGGCAGGCTTCACCTTTCTTCAAATCATTTGACTGGAAAGATTCCAAAAGAACTGAGGAAGATGAAAAGCCTGTTTGAACTGAAGATCAGCGACAATCATCTTTCAGGAAATATTCCAACAGAACTAGGATCGTTGCAGAATCTGGCAATCTTGCACCTAGCAGGGAATGAGTTGAGCGGCAACATACCAACAGAAGTTGTGCAGTTACCCAACTTGTTGGAATTGAACTTGAGCAACAACAAACTACAGGGAAGCATCCCCTCTGACTTCCCCTCGTTGCAGCCTCTCGAATCTCTTGATCTTAGTTGGAATTCATTCAATGGAACAATACCCACAGTGCTTGGAGAGATAAAGCAATTGAAATATTTAAACCTCTCACACAATAATCTTTTTGGCACAATTCCATCTAGTTTTGATGGTATGTCAAGCTTAGTTTCTGTCAACATATCATACAACCAGTTGGAAGGGCCACTTCCAGATAACAAAGCCTTTCTTCATGCTTCATTTCAGTCACTGAAAAGTAATAGAGGCTTGTGTGGTAATGTCACTGGCTTGGAGTTATGCACAACCAACAATAACCATAAGAGTCACAAGGTCATGTTATTAGTATTACTTCTTATCTTTGGAGTCCTAGCACTAGCACTTTGTGTGATTGGTGTTTCAGTGTATATACTTTGTAGAAAAGCAAGAAAGAAAGAAGAGCCAGCTAAAGAAATGCAACCAGAAGAAAATTTTTCCATTTGGAGCCATGATGGAAAAATGGCGTTTGAAACTATCATTGAAGCTACCAATAATTTTGATGACAAATATCTCATTGGAATTGGAGGGCAAGGATCCGTTTACAAGGCTGAGTTGCCTTCAGGTATGGTTGTTGCTGTGAAGAAACTTCATATGGAATCAGATGCAGAGGACAAGTACAATTTGAGAGCATTTGAGAATGAAATCAAAGCATTGACAGAAATGAGGCACCGCAACATCATAAAGCTATATGGATTTTGCCAGCATTCACAGTTCTCATTTTTGGTTTATGAGTTCTTGGAAGGTGGCAGTTTGGATCAAGTACTTGGCAGTGAAGAGCAAGCAAGTACACTTGATTGGGAGAGGAGGGTGAATGTGGTTAAAGGAGTTGCAAATGCTTTGTCATATATGCATCATGATTGCAAACCCCCCATAGTTCACCGTGACATATCAAGCAAGAACATTCTGTTGGACTCAGATTATGAAGCTCATGTCTCTGATTTTGGAACTGCTAAGTTTTTGAAACCAGATTCAAATTGGACAACACTTGCAGTCACCTATGGCTATGGAGCTCCAGAGCTAGCTCAGACTATGGAAGTGACAGAGAAATGTGATGTATATAGCTTTGGAGTGCTTTGTTTGGAGATTCTTATGGGAAAGCATCCAGCGGATCTCATAAGTTCATTTTTGTCACCATCAACAGCATCAATAACATACAATTTGTTATTGGTTGATGTCATAGATCAAAGGCCTCCCCATCCTGAAAAATCAATCATTGGGGGAATAATGTTGATCACAAAGTGGGCACTTGAGTGCTTGAGACAAAGTCCACAATCTCGGCCAACTATGCATCAAGTTTCTAAAGAGCTTATGATGGGGAAATTGCCTTTACCGGATGACCAATTTGCTATGATCAGAATTGGACAACTCAATGAAGAATGGGAAACTCCACTTATGTGA 3231 0.4024 MSSKINSNFMRIIVACRWILWLVQLVASQASIEEAIALLKWKSSLENQSQVVLSSWKNGTSPCRWGGIQCDHSNSVAIMNLENLGLKGTLHSLSFSSFPNLLSINIYNNFFHGTIPPQISNLSRVNHLNFSQNSFDGSIPKEMWTLKSLERLDLSLCHLSGQALAASISNLSNLSFLDISDNYNLSGHIPPEVGKLNKLFRLSSGRNKLFGPIPKEIGMLTSLWYLDLQGNTLSGTIPSTIGNMTNLQQLYLANNTLSGIIPPSIWNMSNLTLLWVNNNQLSGSIPASIDNLTNMDDLTLDKNHLSGSIPSTIGNMTKLNKLFLRHNQFSGSIPASLGNMNNLKVLSLQDNNLSGFIPATIGQLHKLYLLELSFNKLSGNIPQAINNISNIKFFQVEENNLTGHLPPQICSGGSLKTFNADNNHFTGPIPSSLKNCSSIKRLKLQANHLEGDIAHDFGIYPNLIHLDLSDNRLYGQISPEWGKSDNLENMILSNNNITGVIPLQIAEAAKLGRLHLSSNHLTGKIPKELRKMKSLFELKISDNHLSGNIPTELGSLQNLAILHLAGNELSGNIPTEVVQLPNLLELNLSNNKLQGSIPSDFPSLQPLESLDLSWNSFNGTIPTVLGEIKQLKYLNLSHNNLFGTIPSSFDGMSSLVSVNISYNQLEGPLPDNKAFLHASFQSLKSNRGLCGNVTGLELCTTNNNHKSHKVMLLVLLLIFGVLALALCVIGVSVYILCRKARKKEEPAKEMQPEENFSIWSHDGKMAFETIIEATNNFDDKYLIGIGGQGSVYKAELPSGMVVAVKKLHMESDAEDKYNLRAFENEIKALTEMRHRNIIKLYGFCQHSQFSFLVYEFLEGGSLDQVLGSEEQASTLDWERRVNVVKGVANALSYMHHDCKPPIVHRDISSKNILLDSDYEAHVSDFGTAKFLKPDSNWTTLAVTYGYGAPELAQTMEVTEKCDVYSFGVLCLEILMGKHPADLISSFLSPSTASITYNLLLVDVIDQRPPHPEKSIIGGIMLITKWALECLRQSPQSRPTMHQVSKELMMGKLPLPDDQFAMIRIGQLNEEWETPLM 1076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02671 1076 SUPERFAMILY RNI-like 322 670 - -
Adu04g02671 1076 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Adu04g02671 1076 Pfam Protein kinase domain 779 1045 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02671 1076 Gene3D Ribonuclease Inhibitor 32 182 IPR032675 -
Adu04g02671 1076 Gene3D Ribonuclease Inhibitor 183 290 IPR032675 -
Adu04g02671 1076 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 248 1067 - -
Adu04g02671 1076 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 164 250 - -
Adu04g02671 1076 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 17 176 - -
Adu04g02671 1076 Pfam Leucine rich repeat 318 377 IPR001611 GO:0005515
Adu04g02671 1076 Pfam Leucine rich repeat 486 545 IPR001611 GO:0005515
Adu04g02671 1076 Pfam Leucine rich repeat 607 665 IPR001611 GO:0005515
Adu04g02671 1076 Pfam Leucine rich repeat 222 281 IPR001611 GO:0005515
Adu04g02671 1076 SMART LRR_sd22_2 460 489 - -
Adu04g02671 1076 SMART LRR_sd22_2 364 390 - -
Adu04g02671 1076 SMART LRR_sd22_2 604 636 - -
Adu04g02671 1076 SMART LRR_sd22_2 268 294 - -
Adu04g02671 1076 SMART LRR_sd22_2 146 173 - -
Adu04g02671 1076 Gene3D Phosphorylase Kinase; domain 1 737 856 - -
Adu04g02671 1076 SUPERFAMILY Protein kinase-like (PK-like) 758 1047 IPR011009 -
Adu04g02671 1076 Gene3D Ribonuclease Inhibitor 364 702 IPR032675 -
Adu04g02671 1076 SUPERFAMILY RNI-like 80 403 - -
Adu04g02671 1076 SMART LRR_typ_2 628 651 IPR003591 -
Adu04g02671 1076 SMART LRR_typ_2 340 364 IPR003591 -
Adu04g02671 1076 SMART LRR_typ_2 532 556 IPR003591 -
Adu04g02671 1076 SMART LRR_typ_2 244 267 IPR003591 -
Adu04g02671 1076 SMART LRR_typ_2 580 604 IPR003591 -
Adu04g02671 1076 SMART LRR_typ_2 268 292 IPR003591 -
Adu04g02671 1076 SMART LRR_typ_2 316 339 IPR003591 -
Adu04g02671 1076 SMART LRR_typ_2 220 243 IPR003591 -
Adu04g02671 1076 SMART LRR_typ_2 146 171 IPR003591 -
Adu04g02671 1076 Gene3D Ribonuclease Inhibitor 291 363 IPR032675 -
Adu04g02671 1076 ProSiteProfiles Leucine-rich repeat profile. 582 604 IPR001611 GO:0005515
Adu04g02671 1076 Gene3D Transferase(Phosphotransferase) domain 1 857 1052 - -
Adu04g02671 1076 ProSiteProfiles Protein kinase domain profile. 777 1049 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02671 1076 ProSitePatterns Tyrosine protein kinases specific active-site signature. 902 914 IPR008266 GO:0004672|GO:0006468
Adu04g02671 1076 PANTHER LRR RECEPTOR-LIKE KINASE 17 176 - -
Adu04g02671 1076 PANTHER LRR RECEPTOR-LIKE KINASE 248 1067 - -
Adu04g02671 1076 PANTHER LRR RECEPTOR-LIKE KINASE 164 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02671 Adu-Chr4 113774619 113777949 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02671 10 949 Receptor kinase-like Gene Family AT4G08850 44.188 0.0 746
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Adu04g02671 Pkinase 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02671 - - aip:107635237 1419.83