Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02668 ATGTTCATCACATTCATCATGTGTATGATTCTAACACTCCCTTCAACCCAAGTTGTTGGAGATAATGAAGATAGTGAAGCAAATGCTCTCCTGAAATGGAGATCTACCCTTGACAACCATAGTCAAAGTCTTCTATCATCTTGGAACAGCACCACTAGTCCATGCAAATTTGAAGGAATTCAATGTGATAATAATAAGTCAAACTCTGTCTCCACCATAATTCTTCCAAATTATGGACTTGAAGGTACACTCCATGGACTAAACTTTTCTTCATTTCCCAACCTTGTTAGCATAGACATTAACAACAATTCCTTCTATGGTACCATTCCTCCACAAATTGGTAACTTGTCTAGAATTACCAATTTGAACATGTCTTATAATCGTTTCGATGGTTCAATTCCCAATGAAATGTGGGCACTAAGGTCATTACATAAGCTTGATCTTTCTAACTGCCTTCTCAATGGTAGCATATCTGCTAATATAGCAAACTTGACCAATTTGTCACACCTAGATTTAGGAGGAAATAATCTAGAAGGCAAAATTCCCCAAGAAATTGGGATGTTGAGGAACTTAGAGTATCTAGGAATTGCAGAAAATTCTCTTGTGACAGGATCAATTCCAAAGGAGATTGGAATGTTAACAAACCTGAGGTTCCTTGATTTGTCATATTGTCCTCTCTCTGGCACTATCCCTTCAGAAATTGGAAAATTGACCCATTTGACTTTTCTTCAATTCATTCAAAACAACCTCTTTGGTCCAATTCCACCCTCCATTTTGAACTTGACTAACTTGACTAACCTTTTACTTTCCACCAATAATTTTTCTGGTCCAATCCCAAGTTCAGTTGGGAAATTGGTTAATCTTGAAATGCTTGATCTGTCTCAAACTCAAATGTCTGGTCCTATTCCTGATTCTATTGGAAACTTGACAAAGCTCACCACATTGTACTTGTACCAAAGCAAATTCTCAGGACAAATTCCTTCAACTATAGGGAACTTGGTCAATTTGAATGTTCTTGTCCTTGCAGAGAACAATTTCTCTGGTCCTATTCCTTCAACTTTAGGTAACTTAATTAGGCTCACTGATCTTCAGTTGGCCACAAACAAGTTCAATGGTAGCATTCCAGAGGAGATGAATAATGTCATAAACTTGGGCAATTTGCAGCTATCTGAGAACAATTTTGTTGGTAGTTTGCCATCACAAATATGCTTAGGTGGTGCATTAACCAACTTCAGTGCTGATCATAACAATTTCACTGGTCCAGTACCAAGAACCTTGAAGAATTGCTCTAGTATCCTTAGAATAAGGCTTGATTCAAACCACATTGAAGGTAACATAACAGAAGATTTTGGTGTATATCCAAATTTGGACTACATCAATCTCAGTGGCAACAAGTTTTATGGCCACATTTCTCCAAACTGGGGAAAATGTCCTAAACTTACTAGTCTTATAATTGGAAGCAACAATGTCACTGGTGTTATACCATTGGAACTTGTTGAGGCAACCAATTTAGGTATGCTCGATCTTTCGTCGAATCAATTGGTTGGAAAAGTTCCCAAGGAACTTGGCAAGTTGAAGAAACTAGTCCAAGTCAAAATTGGCAACAACCTTCTTTCAGGAAACATTCCAACAGAAATTGGACAGCTTCAGAGTCTTGAGATCTTGAATCTTGGAGGAAACAAGTTGAATGGCGCTATACCAAAAGCAGTTGTGGAGTTACAGAAGCTAAGGGAGCTGAATTTGAGCAAGAACAAGCTTGGTGGAAGCATTCCCTCTGTGTTTGGCCAATCAATGGTATCTCTCGATCTCAGTGGAAATTCATTGGATGGAACAATACCAACAAGCCTTGGAGGGTTGCAACACTTGCAAGTGTTAGATTTGTCACATAACAATCTTTCAGGTACTATTCCATCAAAATTCAGCCTGACATTGGAATATGTGAACATGTCAGATAACCAGCTAGAAGGGCCAATTCCAAATTTTCCTGCTTTTCTCAATGCTAGTTCATTCAAGAACAACAAAGGTTTGTGTGGGAATATCAAAGGATTGGTTCAATGCTCAACCAACCTCAAAAAGAGCAGCAAAAAACACATCTTATTGTTGGTATTAATCATTACTTTGGTGAGTCTAGCAATGGTTCTTTGTGGGGTTGGAATTGCAATGTACTTTCTTTGTAGAAGTAAAAGGAAATTGAGAAACCAAAGTGAAGTCCAAGCCAAAGAAGGAAGAGTTGAACCACACTTTACAATATGGAGCTATGATGGGAAAATCATGTTTGAGAACATCATTGATGCTACTAAGAATTTTGATGATTACTATCTCACTGGTGTTGGAAGCCAAGGACATGTTTACAAAGCTGAATTGCCTTCAGGACAAGTTGTTGCTGTGAAGAAGCTTCATAATGTGGTAGTAACTGATGGAGAAGTTTCAACAACAAAGGCTTTTACAACTGAAGTTCAAGCATTGACACAGATAAAGCACAGGAACATCATAAAGCTCTATGGATTCTGTTCACATTCACAGTTCTCATTTCTTGTTTATGAGTTCTTGGATGGTGGAAGCTTGGATCAAATACTGAGCAATGAGACACATGCTGCTGAATTTGATTGGGAGAAGAGGGTGAATGTTGTTAAGGGCGTCGCGAATGCTTTGTCTTACATGCATCATGATTGTTCGCCTTCTATAATTCATCGCGATATTTCGAGCAAGAATGTCCTGTTGGATTCAGAGTATGAAGCTCATGTTTCAGATTTTGGGACTGCTAAGTTTCTCAAGCCTGGTTCATATTGTTGGACAACATTTGCTGGTACTTTTGGCTATGCTGCTCCAGAACTTGCACAAACTATGGAAGTGAATGAGAAATGTGATGTGTATAGTTTTGGAGTACTAGCTTTGGAGATTATCATGGGAAAGCACCCTGGAGATCTCATTTCATCATTAATGTCAGCATCCACAGCACCAATAGTCAATGATTTGTTACTAATTGATATCTTGGATCAAAGGCTTCCTCAACCCAACCCCAAGAGTTCAATTGTTGAGGAGGTGATCTTGGTTGCAAGGTTGGCATTTTCTTGCTTGACAACAAGCCCACGTTCTCGTCCAACAATGGATCAAGTTTCAAAGGCCCTTGTAATAGGAAGATCAACTTTGGTGGACCAATTTCCAATGATCAGAGTTGGACAACAACACTGA 3192 0.3872 MFITFIMCMILTLPSTQVVGDNEDSEANALLKWRSTLDNHSQSLLSSWNSTTSPCKFEGIQCDNNKSNSVSTIILPNYGLEGTLHGLNFSSFPNLVSIDINNNSFYGTIPPQIGNLSRITNLNMSYNRFDGSIPNEMWALRSLHKLDLSNCLLNGSISANIANLTNLSHLDLGGNNLEGKIPQEIGMLRNLEYLGIAENSLVTGSIPKEIGMLTNLRFLDLSYCPLSGTIPSEIGKLTHLTFLQFIQNNLFGPIPPSILNLTNLTNLLLSTNNFSGPIPSSVGKLVNLEMLDLSQTQMSGPIPDSIGNLTKLTTLYLYQSKFSGQIPSTIGNLVNLNVLVLAENNFSGPIPSTLGNLIRLTDLQLATNKFNGSIPEEMNNVINLGNLQLSENNFVGSLPSQICLGGALTNFSADHNNFTGPVPRTLKNCSSILRIRLDSNHIEGNITEDFGVYPNLDYINLSGNKFYGHISPNWGKCPKLTSLIIGSNNVTGVIPLELVEATNLGMLDLSSNQLVGKVPKELGKLKKLVQVKIGNNLLSGNIPTEIGQLQSLEILNLGGNKLNGAIPKAVVELQKLRELNLSKNKLGGSIPSVFGQSMVSLDLSGNSLDGTIPTSLGGLQHLQVLDLSHNNLSGTIPSKFSLTLEYVNMSDNQLEGPIPNFPAFLNASSFKNNKGLCGNIKGLVQCSTNLKKSSKKHILLLVLIITLVSLAMVLCGVGIAMYFLCRSKRKLRNQSEVQAKEGRVEPHFTIWSYDGKIMFENIIDATKNFDDYYLTGVGSQGHVYKAELPSGQVVAVKKLHNVVVTDGEVSTTKAFTTEVQALTQIKHRNIIKLYGFCSHSQFSFLVYEFLDGGSLDQILSNETHAAEFDWEKRVNVVKGVANALSYMHHDCSPSIIHRDISSKNVLLDSEYEAHVSDFGTAKFLKPGSYCWTTFAGTFGYAAPELAQTMEVNEKCDVYSFGVLALEIIMGKHPGDLISSLMSASTAPIVNDLLLIDILDQRLPQPNPKSSIVEEVILVARLAFSCLTTSPRSRPTMDQVSKALVIGRSTLVDQFPMIRVGQQH 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02668 1063 Gene3D Ribonuclease Inhibitor 283 363 IPR032675 -
Adu04g02668 1063 Pfam Leucine rich repeat 533 586 IPR001611 GO:0005515
Adu04g02668 1063 Pfam Leucine rich repeat 598 654 IPR001611 GO:0005515
Adu04g02668 1063 Pfam Leucine rich repeat 93 153 IPR001611 GO:0005515
Adu04g02668 1063 ProSiteProfiles Leucine-rich repeat profile. 621 643 IPR001611 GO:0005515
Adu04g02668 1063 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 9 168 - -
Adu04g02668 1063 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 166 252 - -
Adu04g02668 1063 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 244 1062 - -
Adu04g02668 1063 Gene3D Ribonuclease Inhibitor 180 282 IPR032675 -
Adu04g02668 1063 SUPERFAMILY L domain-like 47 275 - -
Adu04g02668 1063 PRINTS Leucine-rich repeat signature 598 611 - -
Adu04g02668 1063 PRINTS Leucine-rich repeat signature 619 632 - -
Adu04g02668 1063 SUPERFAMILY L domain-like 436 670 - -
Adu04g02668 1063 Pfam Leucine Rich Repeat 215 237 IPR001611 GO:0005515
Adu04g02668 1063 Pfam Leucine Rich Repeat 166 185 IPR001611 GO:0005515
Adu04g02668 1063 SUPERFAMILY L domain-like 207 466 - -
Adu04g02668 1063 Pfam Leucine rich repeat N-terminal domain 24 63 IPR013210 -
Adu04g02668 1063 SUPERFAMILY Protein kinase-like (PK-like) 750 1043 IPR011009 -
Adu04g02668 1063 Gene3D Transferase(Phosphotransferase) domain 1 850 1050 - -
Adu04g02668 1063 SMART LRR_typ_2 573 597 IPR003591 -
Adu04g02668 1063 SMART LRR_typ_2 549 572 IPR003591 -
Adu04g02668 1063 SMART LRR_typ_2 381 405 IPR003591 -
Adu04g02668 1063 SMART LRR_typ_2 261 285 IPR003591 -
Adu04g02668 1063 SMART LRR_typ_2 92 116 IPR003591 -
Adu04g02668 1063 SMART LRR_typ_2 164 188 IPR003591 -
Adu04g02668 1063 SMART LRR_typ_2 213 237 IPR003591 -
Adu04g02668 1063 SMART LRR_typ_2 333 357 IPR003591 -
Adu04g02668 1063 SMART LRR_typ_2 619 642 IPR003591 -
Adu04g02668 1063 ProSiteProfiles Protein kinase domain profile. 769 1050 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02668 1063 Gene3D Ribonuclease Inhibitor 22 179 IPR032675 -
Adu04g02668 1063 Pfam Protein kinase domain 776 1041 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02668 1063 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 244 1062 - -
Adu04g02668 1063 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 9 168 - -
Adu04g02668 1063 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 166 252 - -
Adu04g02668 1063 ProSitePatterns Tyrosine protein kinases specific active-site signature. 895 907 IPR008266 GO:0004672|GO:0006468
Adu04g02668 1063 Gene3D Phosphorylase Kinase; domain 1 729 849 - -
Adu04g02668 1063 Gene3D Ribonuclease Inhibitor 364 689 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02668 Adu-Chr4 113736254 113739949 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02668 26 943 Receptor kinase-like Gene Family AT4G08850 43.010 0.0 710
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Adu04g02668 Pkinase 1.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02668 - - gmx:100814634 1218.37