Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02664 ATGTTCTGTGCCATGAAAAAACATAGAAATGCACTTTCAGCATTTATGCAGGGGATTGAAGATCCACACAAGTTTCCCTCATCTAGGTCCACTGAACAAGATTGCTGCAAATGGTTTGGAGTTGAATGCAACAACATCACAGGGAATGATTCCACCACTGAGCACCCAACTTCAGAGCTTTTTGGAGCTCCCCTTCTCAAGAACTGCACACAAGAGAAAGGGCACAATAGATCCAAACAGAAGGAAGACAGAGATAGTGATGAGTTTGGAACCTCTTTCCTCATTGGCATGGGAGTTGGCTTTGCTTCTTGTTTCTGGGTAGTTCGTAGCACCATTGTCTTCATCAAGAGATGTAGGCATGCTTATTTTCGGATGCTTGATAACCTCTATATCTTTGTTGTGCTTCAAGTTCAGTTCAGTTCAGCACACACAAAAATGCTTCTCTCTTTACACCTCCCTTCACCATCCCCTTCTTCTTACCACACTCCTTCTAGAACCTTCCACAACAAACCCCACTACATCAAGTTCCGTACATCTTACCGCCAAAATCTCCGTTACCTCCAACACCTAACCGTTATCCCGCCCGACTCCCTCCCTGACTCCGACACTCTCCACCGCATATTCACCATCGTTAACCTCCTCAAATCCCACTCCCTCTCCGACTCCGACATCCCCCGCATCGCCGCTGCTGCACCCTCCCTCTTCTCCCCCTCCTCCGCTGCCTTCTCCCCCGATAACATATCCGCCGTGTTCCACTTCCTCGCCACCGACGTCGCCGCCTCCTCCGCCGAGTCCCGCGGCCTCGTCCTGCGCTGCCCTCACCTACTCCTCTCCCCGCACCCCGACCTCTGCCTCCGCCCAACGCTCTACTTCCTCCGCGACGAGATCGGGCTCTCCGGTCTGAACCGGCCGACGAACAGGAACGCGCATCTGCTGAACACGCGCGTGGAGGATCTGCGCGTGAGGGTGGAGTTTTTGACGGAGGAGGTTGGGTTTGAGTATGAGGAGGCGGTTAGGGCGTTGGTACGGGTACCGGCTATATTCGGTTACGGTTTGGAAAGTAATTTGAGGCCGAAATTTGAGTATTTGGTTGGTGAGATGGGTAGGGATGTTGAAGAACTGAAAAAGTTTCCACACTACTTTGGGTTTAGCTTGCGTAACAAAATTGTGCCAAGGCATTTACATTTGAAGCAAATGGGTGTTGTTGATGTTCCTTTGAATAAGATGCTTATGTGGCGTGATGAAAGATTCTATGCAAAATGGAAGTGA 1269 0.5035 MFCAMKKHRNALSAFMQGIEDPHKFPSSRSTEQDCCKWFGVECNNITGNDSTTEHPTSELFGAPLLKNCTQEKGHNRSKQKEDRDSDEFGTSFLIGMGVGFASCFWVVRSTIVFIKRCRHAYFRMLDNLYIFVVLQVQFSSAHTKMLLSLHLPSPSPSSYHTPSRTFHNKPHYIKFRTSYRQNLRYLQHLTVIPPDSLPDSDTLHRIFTIVNLLKSHSLSDSDIPRIAAAAPSLFSPSSAAFSPDNISAVFHFLATDVAASSAESRGLVLRCPHLLLSPHPDLCLRPTLYFLRDEIGLSGLNRPTNRNAHLLNTRVEDLRVRVEFLTEEVGFEYEEAVRALVRVPAIFGYGLESNLRPKFEYLVGEMGRDVEELKKFPHYFGFSLRNKIVPRHLHLKQMGVVDVPLNKMLMWRDERFYAKWK 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02664 422 SMART mt_12 371 402 IPR003690 GO:0003690|GO:0006355
Adu04g02664 422 SMART mt_12 338 370 IPR003690 GO:0003690|GO:0006355
Adu04g02664 422 SMART mt_12 266 299 IPR003690 GO:0003690|GO:0006355
Adu04g02664 422 SMART mt_12 302 333 IPR003690 GO:0003690|GO:0006355
Adu04g02664 422 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTIC 163 422 - -
Adu04g02664 422 Pfam mTERF 246 417 IPR003690 GO:0003690|GO:0006355
Adu04g02664 422 Gene3D Transcription termination factor 3, mitochondrial 195 422 IPR038538 -
Adu04g02664 422 Coils Coil 309 329 - -
Adu04g02664 422 PANTHER CGI-12 PROTEIN-RELATED 163 422 IPR003690 GO:0003690|GO:0006355
Adu04g02664 422 Pfam Leucine rich repeat N-terminal domain 9 44 IPR013210 -
Adu04g02664 422 Gene3D Ribonuclease Inhibitor 6 68 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02664 Adu-Chr4 113641698 113644392 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Adu04g02664 mTERF 1.9e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02664 K15032 - gmx:100812333 300.441