Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02646 ATGTTATCAGAGTTGATGAACTTTTTGAGGGCCTGCTTTCGGCCAGGTTCGGATAGGTATGGACATGGTGGTTCGGATGCTGGAGGAAAGCAGGATGGACTATTGTGGTACAAAGACTCCGGGCAGCATTTGCATGGCGAGTTTTCGATGGCTGTTGTCCAAGCCAACAACTTGCTGGAGGATCAGAGCTATATCAGATCAGGATGTTTAAGCACAAATGAGTCTGGCCCTTTTGGCACCTTTGTTGGTGTCTATGATGGCCATGGAGGGCCAGAGACGTCGCGGTTTATCAATGACCATCTAGTTCACCATCTTAAGAGGTTTAGTGCAGAGCAACAATCAATGTCAGTGGATGTTATTCGCAAATCGTTCCAAGCAACAGAAGAAGGATTTACATCCCTGGTTGCCACACAATGGTCGATGAAACCACAAATTGCAGCTGTAGGATCATGCTGTCTTGTTGGTGTTATATGCAATGGAAGCCTTTATGTGGCGAATGTTGGTGATTCGCGGGCTGTTATGGGAAGAGCAGTTAAGGCAACTGGGGAAGTTTTGGCTGTCCAGTTGTCTGCAGAACACAATGCATCGATAGAATCCGTAAGACAGGAGCTGAAATCTATGCACCCTGATGATTCACAGATTGTTGTTCTGAAGCATAATGTGTGGCGTGTGAAGGGCCTTATCCAAGTTTCTCGATCTATTGGCGATGTATATCTTAAAAAGGCCGAGTTCAACCGAGAGCCTCTATATGCAAAGTTTCGCCTTCGCGAACCAATAAAGAAGCCTATATTGAGCTCAGAACCATCTATATCAGTGCACCAGTTGCAGCCACAAGATCAGTTTGTTATATTCGCATCCGATGGACTTTGGGAACACTTTAGTAATCAAGAGGCAGTGGATATAGTTCAACATAATCCCCGCAATGGAATTGCAAGGAGGCTGGTTAAAATTGCCCTGCAAGAAGCAGCAAAGAAAAGAGAAATGAGATATTCAGACCTTAAGAAAATCGACCGAGGGGTTCGTCGCCATTTCCACGACGATATCACTGTGATTGTTGTGTTCATAGACTCAACTTTTGTGAGCAGGGCAACCTGTGTCAAGTTCCCTTGTATTTCTCTTAGAGGCGGCGGCGTCAGCCTTCCTTCTAACACACTGGCACCTTGTACAACGCCGACAGAGGCCGGCGCCACCTGA 1194 0.4631 MLSELMNFLRACFRPGSDRYGHGGSDAGGKQDGLLWYKDSGQHLHGEFSMAVVQANNLLEDQSYIRSGCLSTNESGPFGTFVGVYDGHGGPETSRFINDHLVHHLKRFSAEQQSMSVDVIRKSFQATEEGFTSLVATQWSMKPQIAAVGSCCLVGVICNGSLYVANVGDSRAVMGRAVKATGEVLAVQLSAEHNASIESVRQELKSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYAKFRLREPIKKPILSSEPSISVHQLQPQDQFVIFASDGLWEHFSNQEAVDIVQHNPRNGIARRLVKIALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFIDSTFVSRATCVKFPCISLRGGGVSLPSNTLAPCTTPTEAGAT 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02646 397 Gene3D - 36 364 IPR036457 -
Adu04g02646 397 PANTHER ALPHABET, ISOFORM E-RELATED 5 387 - -
Adu04g02646 397 ProSiteProfiles PPM-type phosphatase domain profile. 44 355 IPR001932 -
Adu04g02646 397 SMART PP2C_4 41 353 IPR001932 -
Adu04g02646 397 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 5 387 - -
Adu04g02646 397 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Adu04g02646 397 SUPERFAMILY PP2C-like 54 356 IPR036457 -
Adu04g02646 397 CDD PP2Cc 48 355 IPR001932 -
Adu04g02646 397 Pfam Protein phosphatase 2C 80 324 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02646 Adu-Chr4 113452190 113456006 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02646 1 396 PP2C-type Phosphatase Gene Family AT4G38520 74.242 0.0 636
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02646 - K01102 tcc:18607514 684.485