Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02645 ATGAAACGGTTATTATTTGAAGTTCCAAGGATGGGTGTGGCTCAAAACATTCCTGACATGGAGGAGGAGGGAACATTGGAGATTGGAATGGAATACAGAACTGTGTCTGGTGTTGCTGGACCGTTGGTTATTCTTGATAAAGTTAAGGGACCAAAATTTCAAGAGATTGTTAATATTCGGTTAGGGGATGGAACTTCTCGGCGTGGACAAGTTCTAGAAGTTGATGGTGAGAAAGCTGTTGTTCAGGTCTTCGAAGGTACCTCTGGGATTGACAATAAGTTTACAACTGTGCAATTTACTGGAGAGGTATTGAAAACTCCTGTTTCGCTCGACATGCTTGGCCGCATATTTAATGGCTCGGGAAAACCCATTGATAATGGTCCACCCATATTACCAGAGGCTTACTTGGACATATCAGGAAGTTCCATCAATCCTAGTGAGAGAACCTATCCAGAGGAGATGATACAAACCGGAATTTCTACAATTGATGTCATGAATTCTATTGCTAGAGGTCAAAAGATCCCGCTATTCTCAGCTGCTGGTCTCCCCCATAATGAAATTGCTGCACAGATATGTCGTCAGGCTGGCTTAGTCAAGCGATTAGAGAAATCTGATAATCTTCTTGAGGGTGGAGAAGACGACAATTTTGCCATTGTGTTTGCTGCTATGGGAGCCAATGATCCTACAATTGAGCGTATCATCACCCCTCGTATTGCTCTTACTACTGCTGAATATCTGGCTTATGAATGTGGCAAGCATGTTCTTGTGATACTCACAGATATGAGTTCATATGCCGATGCTCTTCGTGAGGTATCTGCTGCCCGAGAAGAAGTGCCAGGACGACGTGGCTATCCCGGTTACATGTACACAGATCTTGCAACAATATACGAACGTGCTGGAAGAATCGAGGGGCGAAAAGGCTCTATTACTCAGATTCCTATTCTAACTATGCCAAATGATGATATCACGCATCCAACTCCCGATCTTACAGGATATATTACCGAGGGACAGATATATATTGACAGACAGCTGCATAACAGGCAGCAGATATATCCACCAATCAATGTTCTTCCATCACTGTCTCGATTGATGAAGAGTGCCATCGGCGAGGGAATGACTCGAAAGGATCATTCTGATGTATCCAACCAGCTCTATGCAAATTATGCCATAGGAAAGGATGTTCAGGCAATGAAAGCTGTGGTTGGAGAAGAAGCACTTTCATCTGAGGACTTGCTATATCTGGAATTTCTGGACAAATTCGAGCGAAAGTTTGTGACGCAAGGAGCTTATGACACCCGCAACATCTTCCAGTCACTAGATCTTGCGTGGACCTTGCTTCGGATCTTTCCCCGGGAGCTTCTTCACCGTATACCGGCCAAGACCCTCGACCAGTTCTACAGCCGAGATTCCGGTAACTGA 1419 0.4454 MKRLLFEVPRMGVAQNIPDMEEEGTLEIGMEYRTVSGVAGPLVILDKVKGPKFQEIVNIRLGDGTSRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKSDNLLEGGEDDNFAIVFAAMGANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQQIYPPINVLPSLSRLMKSAIGEGMTRKDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVTQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQFYSRDSGN 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02645 472 CDD ATP-synt_V_A-type_beta_C 371 465 - -
Adu04g02645 472 Gene3D - 40 471 - -
Adu04g02645 472 PANTHER V-TYPE PROTON ATPASE SUBUNIT B 225 472 IPR022879 -
Adu04g02645 472 PANTHER V-TYPE PROTON ATPASE SUBUNIT B 13 226 IPR022879 -
Adu04g02645 472 PANTHER V-TYPE PROTON ATPASE SUBUNIT B1-RELATED 225 472 - -
Adu04g02645 472 PANTHER V-TYPE PROTON ATPASE SUBUNIT B1-RELATED 13 226 - -
Adu04g02645 472 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 158 361 IPR000194 GO:0005524
Adu04g02645 472 CDD V_A-ATPase_B 103 363 - -
Adu04g02645 472 ProSitePatterns ATP synthase alpha and beta subunits signature. 352 361 IPR020003 GO:0005524
Adu04g02645 472 CDD ATP-synt_V_A-type_beta_N 31 102 - -
Adu04g02645 472 Hamap V-type ATP synthase beta chain [atpB]. 29 470 IPR022879 -
Adu04g02645 472 Pfam ATP synthase alpha/beta family, beta-barrel domain 35 101 IPR004100 GO:0046034|GO:1902600
Adu04g02645 472 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 105 367 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02645 Adu-Chr4 113444732 113448884 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02645 10 472 Primary Pumps ATPases(2) AT4G38510 90.428 0.0 891
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02645 K02147 - gmx:100791429 875.544