Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02628 ATGGAGAATTTATTCAAGAGTTGGATTTCTCGACATCTGGGAATGGAAGAAGAAGAAGAAGAAAATGATGATACGATCATCATGAACAACTACTCATTGAATGAAGAGCAAGAGTTCCTAATGAAAATCTTTAATGGCCGACCAGATTTCTCATCACCAGAAAGTAGCGAACATTATTATTATTCTTCCCCCAATAATAATAACAATAATAGTTATAATAATAATGATCCTAATAATTGTGACACAAGCCCCAATAACAATAACAGTAGTGTATCATTTGAAGACACAAGAGTGCAAAAAAGTAAAAGCTCCAATTCTAGTTCTTCTACCTATCTATTATCATTTGAGCCTAATTCATTTAAAGGAAGAAGTAGAGGTGATGATGGGTTTGAATTATTTGAAGCAAGTATGAATAAAAATGATGAAGGTGGAACAACAAAAAAGCGCAAAGGAAAGACAGTAGATCACATAATAGCTGAGAGGAAAAGGAGGCAAGACCTAACAAGAAGCATCATCCAACTTTCAGCCACTATACCTGGCTTGAAGAAGATGGACAAGGCTCACGTAATTCGTGAATCTCTAAGTTACATAAAAATTCTTCAAGATCGAGTGAAAGAGTTGGAGAACCAAATCAAAGATAGAAGAGTAGATTCAGCAATATTCATAGGAAGATCACAAGACTCATTATCAACAGATAAAAGCACAATCAGCTGTGAAATAACATCAGATAACAACAATGGTGGTGGTGGTTTCAATGAATCATCACTTGAGATTGAAGCAAAAGTCATGGAAAAAGAAGTTCTCATTAGAATCCAATGTGAGAAGCAAAAAAACAACATAATAATGCTCAAAATACATGCCTTTCTTGACAAGCTTCATCTCTCTATAGCAAGTAACAGTGTGATACCATTTGGGACTTCTACTCTCGTAATAATTACCATTGTTGCTGAGATGGATAATGGTGGCAAATTCAGCATGACAATGGATGAACTAGTGAAAAGCCTCAGAGAAGATTTGATGGAGACAAACAATAATGCATGGTAG 1044 0.3506 MENLFKSWISRHLGMEEEEEENDDTIIMNNYSLNEEQEFLMKIFNGRPDFSSPESSEHYYYSSPNNNNNNSYNNNDPNNCDTSPNNNNSSVSFEDTRVQKSKSSNSSSSTYLLSFEPNSFKGRSRGDDGFELFEASMNKNDEGGTTKKRKGKTVDHIIAERKRRQDLTRSIIQLSATIPGLKKMDKAHVIRESLSYIKILQDRVKELENQIKDRRVDSAIFIGRSQDSLSTDKSTISCEITSDNNNGGGGFNESSLEIEAKVMEKEVLIRIQCEKQKNNIIMLKIHAFLDKLHLSIASNSVIPFGTSTLVIITIVAEMDNGGKFSMTMDELVKSLREDLMETNNNAW 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02628 347 PANTHER BHLH TRANSCRIPTION FACTOR 7 344 - -
Adu04g02628 347 Gene3D - 141 216 IPR036638 GO:0046983
Adu04g02628 347 SMART finulus 157 206 IPR011598 GO:0046983
Adu04g02628 347 Pfam Helix-loop-helix DNA-binding domain 155 201 IPR011598 GO:0046983
Adu04g02628 347 MobiDBLite consensus disorder prediction 53 117 - -
Adu04g02628 347 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 151 200 IPR011598 GO:0046983
Adu04g02628 347 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 150 215 IPR036638 GO:0046983
Adu04g02628 347 MobiDBLite consensus disorder prediction 53 118 - -
Adu04g02628 347 Coils Coil 190 217 - -
Adu04g02628 347 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 7 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02628 Adu-Chr4 112881977 112884965 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02628 155 339 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 44.681 2.31e-38 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu04g02628 HLH 2.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02628 - - adu:107486034 579.711