Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02627 ATGATTATTATATGCAGTATCTCTTCTTTCCTTTTCCTTCGTCCCATAATTGTGGTCCACCATAATTGTTGTTCCGGTGGCCTAGGGCCTCTCGAAGTGGAGACGCTGTTCTGGAAGGCGAACGTTGACAAGCCGTTCTCAATGGAGTATGCGAACAACATGTCGGGCTCGGCGTTCAGCTGGAAATGCAGGGAGGAGTGTGCGGCGGCGCTAGCGGAGTCGGCATGGAATATGAGGGAGATTTTAAGGGCAAATGGTTCGTTGTTGAGCTGGTTCACTTGGCATGTTGAGGACCATGACATCCATAGCTTGAATTACCTTCACATGGGTTCTGGGAAGACCTGGTATGGCGTGCCGAGAGATGCAACCGTGGCATTCGAAGATGTTGTTAGGGTTCATGGATATGACTCTGAGATTAATTCTCTTGCTCCAAGTATGCAATTTGAGCTTCGAGCTTCCAATTTAGGTCAACATGTTCAGCAAAATCAAGTTGAATTGTTATAG 504 0.4722 MIIICSISSFLFLRPIIVVHHNCCSGGLGPLEVETLFWKANVDKPFSMEYANNMSGSAFSWKCREECAAALAESAWNMREILRANGSLLSWFTWHVEDHDIHSLNYLHMGSGKTWYGVPRDATVAFEDVVRVHGYDSEINSLAPSMQFELRASNLGQHVQQNQVELL 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02627 167 Pfam JmjC domain, hydroxylase 86 136 IPR003347 -
Adu04g02627 167 ProSiteProfiles JmjC domain profile. 49 167 IPR003347 -
Adu04g02627 167 SUPERFAMILY Clavaminate synthase-like 68 136 - -
Adu04g02627 167 PANTHER LYSINE-SPECIFIC DEMETHYLASE REF6 89 142 - -
Adu04g02627 167 PANTHER LYSINE-SPECIFIC DEMETHYLASE REF6 27 89 - -
Adu04g02627 167 PANTHER LYSINE-SPECIFIC DEMETHYLASE 89 142 - -
Adu04g02627 167 PANTHER LYSINE-SPECIFIC DEMETHYLASE 27 89 - -
Adu04g02627 167 Gene3D Cupin 20 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02627 Adu-Chr4 112875946 112876613 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02627 28 59 C2H2 Transcription Factor Family AT5G04240 56.250 2.01e-06 45.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Adu04g02627 JmjC 2.8e-13 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02627 - - adu:107478986 216.468