Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02576 ATGGGGTCCTGCTTCTCTGTGGAAAGCAGGAACCCCAATTCACCATCTTCAGGATTGAGGAAAAGGAAGAATTCCAAGAAGAGGTTTGGATCAAGAAACTCTTCATTTGAGTATTGGAGGAATGAGCCTCTCCATAGGGTCCCTGGTAGGATCTTCCTCAATGGCTCTACCCAAGTTGCTTCCTTGTTCACCCAGCAAGGAAAGAAAGGCACCAATCAAGATGCCATGGTTGTTTGGGAGAACTTTTGTTCCAGACAAGATACTGTTTTCTGTGGTGTTTTCGATGGCCACGGTCCATTTGGTCACATGGTTGCGAAAAAAGTGAGGGATGTTCTTCCTCTAAAGCTGAATGCTCATTGGGAACCTAATGCATCTGGTGAGGATGTCCTCAAGGAAATTAGCGTGAATACGGCAGTAAGCATGAACACAGAAGAGGCTGCATTTGTATCCGCTGATGAGGAATCCAGAGCATCCATTGATGTCGAAGAATTGGAAAAATACCCTGAAATCTTTCTAACAGTTAGAGAGTCTTTTCTGAAGGCCTTCAAAGTTATGGATAGAGAATTGAAGACACACCCTAGCGTCGATTGCTTCTGCAGTGGAACAACAGCAGTAACATTGGTGAAACAGGGTCGTGATCTTATTGTCGGAAATGTTGGTGATTCCAGAGCTGTGCTTGGTACAAGAGAGAAAGATAATTCTCTTGTTGCAGTTCAGTTAACTGTGGATCTAAAACCCAATCTTCCAGCCGAAGCAGAGAGAATTCGTAGATCCATGGCTCGTGCATTCGGAGATTTTTGTCTTAAAGATTTTGGTTTGATATCTGTTCCAGAGGTTTCATACAGAAGACTCACCGAGAAGGATGAGTTTATCGTCTTAGCAACCGATGGGATTTGGGATGTTCTCTCAAACAAAGAAGTGGTAGACATCGTAGCAGCAGCACCTGCACGGTCCATGGCAGCTCGAGCGCTGGTCGAGTCAGCTGTTAGAGCTTGGAGGTACAAATATCCGACTTCCAAGGTTGATGACTGTGCAGTGGTTTGCCTCTTTCTGGACCCGGACTTGCATAAAGTATCTAATGCTTCCTATGCTAAGTCCAAAGAGCAGCAAAGTTCAGGGATCAATGCAAACGGCGGCAGCGAAGAAGTGGAAAGCCTTCTGGAACCTGCCGGTCTGGTAAGGTCCGGAACTTGCAGGGAAGTCAATAATGACACATCCAATGGCGAAAGCAACGAAGAAACGTTGAAAGATGATGTGATGGATGCTGGAGAGTGGTCTGCACTCCAAGGAGTGACTCGAGTGAACACACTGTTGAATCTTCCGAGATACGACCCTCGCAAAGATAAGGGTGAGTCGGCCAGCCCGAAAAAACGCAAATGA 1380 0.4601 MGSCFSVESRNPNSPSSGLRKRKNSKKRFGSRNSSFEYWRNEPLHRVPGRIFLNGSTQVASLFTQQGKKGTNQDAMVVWENFCSRQDTVFCGVFDGHGPFGHMVAKKVRDVLPLKLNAHWEPNASGEDVLKEISVNTAVSMNTEEAAFVSADEESRASIDVEELEKYPEIFLTVRESFLKAFKVMDRELKTHPSVDCFCSGTTAVTLVKQGRDLIVGNVGDSRAVLGTREKDNSLVAVQLTVDLKPNLPAEAERIRRSMARAFGDFCLKDFGLISVPEVSYRRLTEKDEFIVLATDGIWDVLSNKEVVDIVAAAPARSMAARALVESAVRAWRYKYPTSKVDDCAVVCLFLDPDLHKVSNASYAKSKEQQSSGINANGGSEEVESLLEPAGLVRSGTCREVNNDTSNGESNEETLKDDVMDAGEWSALQGVTRVNTLLNLPRYDPRKDKGESASPKKRK 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02576 459 PANTHER PROTEIN PHOSPHATASE 2C 33-RELATED 1 257 - -
Adu04g02576 459 ProSiteProfiles PPM-type phosphatase domain profile. 59 351 IPR001932 -
Adu04g02576 459 PANTHER ALPHABET, ISOFORM E-RELATED 1 257 - -
Adu04g02576 459 MobiDBLite consensus disorder prediction 1 19 - -
Adu04g02576 459 SUPERFAMILY PP2C-like 52 352 IPR036457 -
Adu04g02576 459 PANTHER PROTEIN PHOSPHATASE 2C 33-RELATED 258 439 - -
Adu04g02576 459 MobiDBLite consensus disorder prediction 439 459 - -
Adu04g02576 459 Pfam Protein phosphatase 2C 174 330 IPR001932 -
Adu04g02576 459 Gene3D - 53 361 IPR036457 -
Adu04g02576 459 SMART PP2C_4 48 349 IPR001932 -
Adu04g02576 459 CDD PP2Cc 58 351 IPR001932 -
Adu04g02576 459 PANTHER ALPHABET, ISOFORM E-RELATED 258 439 - -
Adu04g02576 459 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02576 Adu-Chr4 112031946 112034573 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02576 1 447 PP2C-type Phosphatase Gene Family AT3G02750 57.196 0.0 524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02576 - - gmx:100790373 689.108