Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02575 ATGGCAGCTGAGCCACAGGTTTCTCTTCTTTCACTTCGGTCTCAACACCTTCACCGGACAAGAGTGGGGCTCCGGCCACGTATACCCTTCCCTCTTCAAGCCCACCAACCTCAACGCCACTCACTGGATACACCTCGTCAAACTCAACGGCTTAACCGCGTCATCCTTACCGCCAAGCACCATGACAGTTTCTGCTTGTGGCCTTCCCAATACACTAACTACTCTGTCCGTTTCTCTCCCTGGAAGGCCGGCACTGGAGATGTCATCGCTGACCTCTCTGCCGCTGCCAAATTTGTCGGCGTTGACCTCGGCATCTACCTCTCCCCTCGGATCGAAGGTGGACTTCGTGTTGAAATAATTGTCTTGAATGCACTTGTTAAAGGCGTCACGGAGAGCACAGAAGTCGCCAGCGCTTCCAATAGCATTgCTGCTCCTTCAGCTTCTCTTGTTACACAACTCCCTGGCTTTGATTCCAATTTCCCATCCAAGCATTACTCCGGATACATAAATATTGATGGAAGTGGTGAGAATGGGAAGAACCTGTTCTACTACTTGGTTAGTTCAGAAAGAAATCCAAAGAAGGATCCACTTGTTCTGTGGCTCAATGGTGGTCCTGGCTGCTCTAGTTTTGATGGATTTGTTTATGAGCATGGACCGTTCAACTTTGAGGCAGCAAAATCAAAAGGGAGTCTCCCCACTTTGCATACTAATCCTTACAGCTGGTCTAAGGTTTCAAATATAATATATTTGGATTCTCCAGTGGGGGTTGGGCTCTCATACTCCAAGAACTCGACCAAATATGTTACTGGGGACCTACAAACCGCGTCTGATACCCATGCTTTCCTCCTAAAGGTATATAATATATATATCTCAATAATAATAATAATAataataataatattttattcattttttataataaaaatattTGGTAGAAAGCCCGTGATCAACTTTAAGGGTTACATGGTGGGTAATGGTGTCACGGACGAAATTTTTGATGGAAATGCTCTTCTCCCATTTGTGCATGGAATGGGCCTCATATCCGACAGTATCTATGAGGATGTAGAAACTTCCTGCAAGGGAAACTTCTACAAATATTACTCAGAGGATACTGAAGATAATAATGATGATTCATGCAGTAAGAGCTTTCAAAAAGTTGATAGGGCTATCGAGGGCCTTAACGTGTATGATATATTGGAACCATGTTACCATGAAGGGGATTCAAATTCAGCATGGATGAAAGCAGCCATTGCTAATGGAACATTGCCAAAGAGTTTTGAAGAATTAGGGTTCACTAATAATAATGATGAGAGGCATCTGAAAGTGAGGAAGAGGATGTTTGGTAGAGCTTGGCCTTTTAGGGCACCTCTCAAACAAGGCCTTGTTCCTTTATGGCCCCAATTATTAGCTCAAACCAGACATGTTGCTTGTGTTAGTGATGTAGTTGCAAGTTCATGGCTAAACAACAACGCAGTAAGGAAAGCCATTCATGCTGAGGAGGAAAGTGTGACAGGGGCATGGGAATTATGCACCGGAAAGATAGAATACAGTCATGATGCTGGAAGCATGATTCCTTACCACAAGAACCTAACTGCCCTTGGTTATAGGGCACTTATTTTCAGTGGAGACCATGATATGTGTGTTCCATTTACCGGAAGTGAAGCATGGACTCGCTCACTTGCATATAACATTATTGATGAATGGAGACCGTGGAACTCCAATGGCCAAATTGCTGGATATTTACAAGGATATGACAACAACCTTATCTTTCTTACAGTTAAGGGAGCTGGGCACACAGTGCCAGAGTATAAGCCACGTGAGGCACTTGATTTTTACACTCGTTGGTTGGAAGGAAGACCAATATAA 1866 0.4341 MAAEPQVSLLSLRSQHLHRTRVGLRPRIPFPLQAHQPQRHSLDTPRQTQRLNRVILTAKHHDSFCLWPSQYTNYSVRFSPWKAGTGDVIADLSAAAKFVGVDLGIYLSPRIEGGLRVEIIVLNALVKGVTESTEVASASNSIAAPSASLVTQLPGFDSNFPSKHYSGYINIDGSGENGKNLFYYLVSSERNPKKDPLVLWLNGGPGCSSFDGFVYEHGPFNFEAAKSKGSLPTLHTNPYSWSKVSNIIYLDSPVGVGLSYSKNSTKYVTGDLQTASDTHAFLLKVYNIYISIIIIIIIIIFYSFFIIKIFGRKPVINFKGYMVGNGVTDEIFDGNALLPFVHGMGLISDSIYEDVETSCKGNFYKYYSEDTEDNNDDSCSKSFQKVDRAIEGLNVYDILEPCYHEGDSNSAWMKAAIANGTLPKSFEELGFTNNNDERHLKVRKRMFGRAWPFRAPLKQGLVPLWPQLLAQTRHVACVSDVVASSWLNNNAVRKAIHAEEESVTGAWELCTGKIEYSHDAGSMIPYHKNLTALGYRALIFSGDHDMCVPFTGSEAWTRSLAYNIIDEWRPWNSNGQIAGYLQGYDNNLIFLTVKGAGHTVPEYKPREALDFYTRWLEGRPI 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02575 621 Gene3D - 474 621 - -
Adu04g02575 621 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 132 620 IPR001563 GO:0004185|GO:0006508
Adu04g02575 621 Pfam Serine carboxypeptidase 154 284 IPR001563 GO:0004185|GO:0006508
Adu04g02575 621 Pfam Serine carboxypeptidase 312 618 IPR001563 GO:0004185|GO:0006508
Adu04g02575 621 SUPERFAMILY (Trans)glycosidases 52 110 IPR017853 -
Adu04g02575 621 PRINTS Carboxypeptidase C serine protease (S10) family signature 237 249 IPR001563 GO:0004185|GO:0006508
Adu04g02575 621 PRINTS Carboxypeptidase C serine protease (S10) family signature 250 260 IPR001563 GO:0004185|GO:0006508
Adu04g02575 621 PRINTS Carboxypeptidase C serine protease (S10) family signature 588 601 IPR001563 GO:0004185|GO:0006508
Adu04g02575 621 PANTHER CARBOXYPEPTIDASE 132 620 - -
Adu04g02575 621 ProSitePatterns Serine carboxypeptidases, histidine active site. 588 605 IPR033124 GO:0004185
Adu04g02575 621 Gene3D Glycosidases 51 114 - -
Adu04g02575 621 Pfam Alpha-L-fucosidase 54 108 IPR000933 GO:0004560|GO:0005975
Adu04g02575 621 Gene3D alpha/beta hydrolase 142 430 IPR029058 -
Adu04g02575 621 SUPERFAMILY alpha/beta-Hydrolases 150 620 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02575 Adu-Chr4 112020992 112030678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02575 482 621 Calmodulin-binding Proteins AT2G22960 50.000 1.55e-41 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02575 K16296 - gmx:100790895 737.643