Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02518 ATGGGGCAGAACTACTATCCCCCTAATGGACTTCCAATTGGTGCTGAACTCACAGTTCCTTTGTTATGTGCTTGTCCAACAGAAAATCAAACTTCAACAGGTGTCACTTCCTTATTGGTTGATTTGATCAACTATGGTGACACCTTGAAGTCCATAGGAGAATCTTATGGTGTTGGTGAACAAAGTATGTTAGAGGCTAATAAGCCACAAAGTAAAAATAGTAGCAGCTTCACCCTCTTGGCCTTGACTCCTATCTTGGTTCCTCTAAGAGGAAAGAGTTGCAAAGAGGATCCAAATAGTTTCTATTGTAACTGTTCTAAGGAATTCCTTGTTGATGGAAGCTTAAAGGGGATTTATTGTGATGAGTCTGATGGTCAAAAATTCCCTGCCAAATTGGTTGTTTGCATTGGTGTTGGCATTGGTGTAGGCTTTCTCTGTTTGTTTCTCTTGGGTTATAAACTATACCAATACATACAGAAAAAGAGAGAAAGGATTCACAAGGAAAAGCTATTCAAACAGAATGGTGGCTACTTGTTACAAGAGAAAGTGTCATCATCACATGGAAATGGATCCCAAAAGGTAATAATGAAGCTTTTCACAGCTGAGGAACTTCAAAGAGCAACAGCTAACTACAACTGGAGCAGGTTTCTTGGTCAAGGTGGATATGGAAAAGTCTACAAAGGAATGCTACCTGATGGAACCATAGTAGCTGTTAAGAGATGTAAGGAGATTGAGAGGAACCAGATTGAGACTTTTGTCAATGAAGTTGTCATTTTATCACAGATTAATCACAGGAACATTGTGAAGCTCTTGGGGTGCTGTCTTGAGACAGAAGCACCACTACTAGTCTATGAGTTCATTCCAAATGGAACACTTGCACAACATATTCATAGCAAACACCATGAATCATCTTCACCACTTTCATGGGATAGCCGGCTTCGAATCGCATGCGAGGTAGCCGGAACAGTGGCCTATATGCATTCTTCAGCTTCAATTCCCatcttccatagagatatcaaacctactaacatactcttagatagtaactatagtgcaaaagtgtctgattttggaacatcaagatcattgccacaagacaagaCTCACTTGACAACACAAATAGGAGGAACTTTCCGATACATCGACCCTGAATATTTCCAATCTAGTCAATTTTCGGATAAGAGTGACATGTATAGTTTTGGAGTTGTGCTTGTTGAAATCATAACTGGGAAGAAGCCGATTTCATTTATAGAAGAAGATGAGGGTCAGAATTTGATTGCTGAATTCATTTCTGTTATGAAGGAGAACAAAGTTTGTGATATCTTGGATCCCAAGGTATTGAAGGAAGCTAAGAAGGATGAGATTGTTGCAATTCAAATCTTGCAATGA 1389 0.3679 MGQNYYPPNGLPIGAELTVPLLCACPTENQTSTGVTSLLVDLINYGDTLKSIGESYGVGEQSMLEANKPQSKNSSSFTLLALTPILVPLRGKSCKEDPNSFYCNCSKEFLVDGSLKGIYCDESDGQKFPAKLVVCIGVGIGVGFLCLFLLGYKLYQYIQKKRERIHKEKLFKQNGGYLLQEKVSSSHGNGSQKVIMKLFTAEELQRATANYNWSRFLGQGGYGKVYKGMLPDGTIVAVKRCKEIERNQIETFVNEVVILSQINHRNIVKLLGCCLETEAPLLVYEFIPNGTLAQHIHSKHHESSSPLSWDSRLRIACEVAGTVAYMHSSASIPIFHRDIKPTNILLDSNYSAKVSDFGTSRSLPQDKTHLTTQIGGTFRYIDPEYFQSSQFSDKSDMYSFGVVLVEIITGKKPISFIEEDEGQNLIAEFISVMKENKVCDILDPKVLKEAKKDEIVAIQILQ 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02518 462 SUPERFAMILY Protein kinase-like (PK-like) 190 445 IPR011009 -
Adu04g02518 462 Gene3D Transferase(Phosphotransferase) domain 1 287 461 - -
Adu04g02518 462 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 1 460 IPR045274 GO:0007166
Adu04g02518 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 334 346 IPR008271 GO:0004672|GO:0006468
Adu04g02518 462 ProSiteProfiles Protein kinase domain profile. 211 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02518 462 Gene3D Phosphorylase Kinase; domain 1 177 286 - -
Adu04g02518 462 Pfam Protein kinase domain 213 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02518 462 PANTHER LYSM TYPE RECEPTOR KINASE 1 460 - -
Adu04g02518 462 SMART serkin_6 211 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02518 462 ProSitePatterns Protein kinases ATP-binding region signature. 217 239 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02518 Adu-Chr4 111439247 111440826 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02518 137 461 Receptor kinase-like Gene Family AT1G16130 53.988 2.57e-122 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Adu04g02518 Pkinase 5.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02518 - - adu:107485803 909.057